Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST1H3AP68431 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.64■□□□□ 0.89
HIST1H3AP68431 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST1H3AP68431 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST1H3AP68431 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H3AP68431 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H3AP68431 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST1H3AP68431 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H3AP68431 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST1H3AP68431 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST1H3AP68431 DUX4L9-201ENST00000449051 1259 ntBASIC20.63■□□□□ 0.89
HIST1H3AP68431 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.63■□□□□ 0.89
HIST1H3AP68431 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.63■□□□□ 0.89
HIST1H3AP68431 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H3AP68431 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H3AP68431 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HIST1H3AP68431 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HIST1H3AP68431 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H3AP68431 FOXO3B-201ENST00000395675 1928 ntBASIC20.62■□□□□ 0.89
HIST1H3AP68431 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H3AP68431 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HIST1H3AP68431 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H3AP68431 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST1H3AP68431 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H3AP68431 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
HIST1H3AP68431 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
HIST1H3AP68431 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H3AP68431 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H3AP68431 KRT18P60-201ENST00000312876 1297 ntBASIC20.61■□□□□ 0.89
HIST1H3AP68431 AC087393.1-201ENST00000582896 145 ntBASIC20.61■□□□□ 0.89
HIST1H3AP68431 MIR6765-201ENST00000614092 87 ntBASIC20.61■□□□□ 0.89
HIST1H3AP68431 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.61■□□□□ 0.89
HIST1H3AP68431 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H3AP68431 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H3AP68431 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST1H3AP68431 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST1H3AP68431 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H3AP68431 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST1H3AP68431 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST1H3AP68431 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H3AP68431 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
HIST1H3AP68431 ABHD17AP5-201ENST00000580133 923 ntBASIC20.6■□□□□ 0.89
HIST1H3AP68431 AC129492.7-201ENST00000622992 756 ntBASIC20.6■□□□□ 0.89
HIST1H3AP68431 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H3AP68431 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H3AP68431 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H3AP68431 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H3AP68431 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.59■□□□□ 0.89
HIST1H3AP68431 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H3AP68431 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
HIST1H3AP68431 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H3AP68431 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H3AP68431 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
HIST1H3AP68431 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H3AP68431 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H3AP68431 AC093323.1-202ENST00000635031 2045 ntBASIC20.58■□□□□ 0.89
HIST1H3AP68431 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H3AP68431 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.58■□□□□ 0.89
HIST1H3AP68431 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H3AP68431 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.88
HIST1H3AP68431 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HIST1H3AP68431 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H3AP68431 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H3AP68431 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H3AP68431 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.57■□□□□ 0.88
HIST1H3AP68431 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.56■□□□□ 0.88
HIST1H3AP68431 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.56■□□□□ 0.88
HIST1H3AP68431 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 NTF6A-201ENST00000591175 560 ntBASIC20.56■□□□□ 0.88
HIST1H3AP68431 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.56■□□□□ 0.88
HIST1H3AP68431 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H3AP68431 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H3AP68431 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H3AP68431 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H3AP68431 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H3AP68431 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H3AP68431 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H3AP68431 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H3AP68431 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H3AP68431 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HIST1H3AP68431 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H3AP68431 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H3AP68431 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.54■□□□□ 0.88
HIST1H3AP68431 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H3AP68431 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HIST1H3AP68431 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H3AP68431 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H3AP68431 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
HIST1H3AP68431 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H3AP68431 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.53■□□□□ 0.88
HIST1H3AP68431 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H3AP68431 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H3AP68431 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms