Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLCNKAP51800 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCNKAP51800 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCNKAP51800 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCNKAP51800 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCNKAP51800 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCNKAP51800 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCNKAP51800 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CLCNKAP51800 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.18■■□□□ 1.3
CLCNKAP51800 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCNKAP51800 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.18■■□□□ 1.3
CLCNKAP51800 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLCNKAP51800 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.17■■□□□ 1.3
CLCNKAP51800 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
CLCNKAP51800 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLCNKAP51800 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLCNKAP51800 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.16■■□□□ 1.3
CLCNKAP51800 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CLCNKAP51800 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.16■■□□□ 1.3
CLCNKAP51800 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLCNKAP51800 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCNKAP51800 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.16■■□□□ 1.3
CLCNKAP51800 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCNKAP51800 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCNKAP51800 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCNKAP51800 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLCNKAP51800 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.15■■□□□ 1.3
CLCNKAP51800 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.15■■□□□ 1.3
CLCNKAP51800 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.15■■□□□ 1.3
CLCNKAP51800 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLCNKAP51800 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLCNKAP51800 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
CLCNKAP51800 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLCNKAP51800 AC120024.1-201ENST00000562672 995 ntBASIC23.14■■□□□ 1.29
CLCNKAP51800 THA1P-201ENST00000590384 1145 ntBASIC23.14■■□□□ 1.29
CLCNKAP51800 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.14■■□□□ 1.29
CLCNKAP51800 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
CLCNKAP51800 FOXO3B-201ENST00000395675 1928 ntBASIC23.14■■□□□ 1.29
CLCNKAP51800 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLCNKAP51800 AC135731.1-201ENST00000569415 2548 ntBASIC23.13■■□□□ 1.29
CLCNKAP51800 AC011551.1-201ENST00000614101 683 ntBASIC23.13■■□□□ 1.29
CLCNKAP51800 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLCNKAP51800 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.13■■□□□ 1.29
CLCNKAP51800 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLCNKAP51800 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLCNKAP51800 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLCNKAP51800 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CLCNKAP51800 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLCNKAP51800 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLCNKAP51800 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CLCNKAP51800 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.12■■□□□ 1.29
CLCNKAP51800 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.11■■□□□ 1.29
CLCNKAP51800 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCNKAP51800 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CLCNKAP51800 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCNKAP51800 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCNKAP51800 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCNKAP51800 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCNKAP51800 Z92544.1-202ENST00000571933 1220 ntBASIC23.11■■□□□ 1.29
CLCNKAP51800 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLCNKAP51800 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.1■■□□□ 1.29
CLCNKAP51800 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CLCNKAP51800 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLCNKAP51800 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLCNKAP51800 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CLCNKAP51800 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLCNKAP51800 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.09■■□□□ 1.29
CLCNKAP51800 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
CLCNKAP51800 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CLCNKAP51800 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.09■■□□□ 1.29
CLCNKAP51800 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLCNKAP51800 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CLCNKAP51800 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CLCNKAP51800 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.08■■□□□ 1.29
CLCNKAP51800 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.08■■□□□ 1.29
CLCNKAP51800 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.08■■□□□ 1.29
CLCNKAP51800 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.08■■□□□ 1.29
CLCNKAP51800 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLCNKAP51800 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLCNKAP51800 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLCNKAP51800 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CLCNKAP51800 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLCNKAP51800 AC137630.3-201ENST00000607245 391 ntBASIC23.07■■□□□ 1.28
CLCNKAP51800 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.07■■□□□ 1.28
CLCNKAP51800 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.07■■□□□ 1.28
CLCNKAP51800 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLCNKAP51800 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms