Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB3BP20337 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RAB3BP20337 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.6■□□□□ 0.89
RAB3BP20337 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB3BP20337 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB3BP20337 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB3BP20337 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB3BP20337 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB3BP20337 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB3BP20337 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB3BP20337 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB3BP20337 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAB3BP20337 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RAB3BP20337 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB3BP20337 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB3BP20337 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB3BP20337 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3BP20337 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3BP20337 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3BP20337 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB3BP20337 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB3BP20337 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RAB3BP20337 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3BP20337 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3BP20337 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3BP20337 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3BP20337 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3BP20337 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RAB3BP20337 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB3BP20337 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3BP20337 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3BP20337 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3BP20337 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB3BP20337 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
RAB3BP20337 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RAB3BP20337 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3BP20337 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3BP20337 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RAB3BP20337 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB3BP20337 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB3BP20337 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3BP20337 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3BP20337 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB3BP20337 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAB3BP20337 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3BP20337 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3BP20337 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3BP20337 ABCB10P4-201ENST00000566803 2184 ntBASIC20.53■□□□□ 0.88
RAB3BP20337 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3BP20337 AL162393.1-201ENST00000437852 946 ntBASIC20.53■□□□□ 0.88
RAB3BP20337 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB3BP20337 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3BP20337 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB3BP20337 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3BP20337 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB3BP20337 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3BP20337 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB3BP20337 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3BP20337 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
RAB3BP20337 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3BP20337 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3BP20337 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3BP20337 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.52■□□□□ 0.88
RAB3BP20337 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RAB3BP20337 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3BP20337 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
RAB3BP20337 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAB3BP20337 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
RAB3BP20337 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3BP20337 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3BP20337 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.51■□□□□ 0.87
RAB3BP20337 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB3BP20337 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3BP20337 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3BP20337 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3BP20337 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3BP20337 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3BP20337 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3BP20337 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3BP20337 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3BP20337 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB3BP20337 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3BP20337 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3BP20337 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3BP20337 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB3BP20337 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3BP20337 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RAB3BP20337 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB3BP20337 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB3BP20337 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3BP20337 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB3BP20337 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3BP20337 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB3BP20337 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB3BP20337 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3BP20337 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3BP20337 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3BP20337 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.48■□□□□ 0.87
RAB3BP20337 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3BP20337 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms