Protein–RNA interactions for Protein: P0C0L4

C4A, Complement C4-A, humanhuman

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4AP0C0L4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
C4AP0C0L4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.22■■■□□ 2.43
C4AP0C0L4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
C4AP0C0L4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.21■■■□□ 2.43
C4AP0C0L4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
C4AP0C0L4 AL356740.2-201ENST00000601559 647 ntBASIC30.21■■■□□ 2.43
C4AP0C0L4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
C4AP0C0L4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.2■■■□□ 2.43
C4AP0C0L4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.2■■■□□ 2.43
C4AP0C0L4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
C4AP0C0L4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.2■■■□□ 2.43
C4AP0C0L4 AC133561.4-201ENST00000566112 224 ntBASIC30.2■■■□□ 2.43
C4AP0C0L4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.2■■■□□ 2.43
C4AP0C0L4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
C4AP0C0L4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.42
C4AP0C0L4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.19■■■□□ 2.42
C4AP0C0L4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
C4AP0C0L4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
C4AP0C0L4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
C4AP0C0L4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
C4AP0C0L4 SNX5-217ENST00000606557 1087 ntBASIC30.18■■■□□ 2.42
C4AP0C0L4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
C4AP0C0L4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
C4AP0C0L4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
C4AP0C0L4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
C4AP0C0L4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
C4AP0C0L4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
C4AP0C0L4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
C4AP0C0L4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC30.16■■■□□ 2.42
C4AP0C0L4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
C4AP0C0L4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.16■■■□□ 2.42
C4AP0C0L4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.16■■■□□ 2.42
C4AP0C0L4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC30.16■■■□□ 2.42
C4AP0C0L4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
C4AP0C0L4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
C4AP0C0L4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
C4AP0C0L4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.15■■■□□ 2.42
C4AP0C0L4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.15■■■□□ 2.42
C4AP0C0L4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.15■■■□□ 2.42
C4AP0C0L4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC30.14■■■□□ 2.42
C4AP0C0L4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.14■■■□□ 2.42
C4AP0C0L4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
C4AP0C0L4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
C4AP0C0L4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.13■■■□□ 2.41
C4AP0C0L4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.13■■■□□ 2.41
C4AP0C0L4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
C4AP0C0L4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC30.13■■■□□ 2.41
C4AP0C0L4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
C4AP0C0L4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
C4AP0C0L4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
C4AP0C0L4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
C4AP0C0L4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
C4AP0C0L4 SUDS3P1-201ENST00000505831 966 ntBASIC30.12■■■□□ 2.41
C4AP0C0L4 AC106739.1-201ENST00000617035 715 ntBASIC30.12■■■□□ 2.41
C4AP0C0L4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
C4AP0C0L4 AP004609.3-201ENST00000610705 1884 ntBASIC30.12■■■□□ 2.41
C4AP0C0L4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
C4AP0C0L4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
C4AP0C0L4 AC026271.2-201ENST00000428091 497 ntBASIC30.11■■■□□ 2.41
C4AP0C0L4 AL031432.3-201ENST00000607698 485 ntBASIC30.11■■■□□ 2.41
C4AP0C0L4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.11■■■□□ 2.41
C4AP0C0L4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
C4AP0C0L4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
C4AP0C0L4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.1■■■□□ 2.41
C4AP0C0L4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
C4AP0C0L4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
C4AP0C0L4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
C4AP0C0L4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
C4AP0C0L4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.09■■■□□ 2.41
C4AP0C0L4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
C4AP0C0L4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
C4AP0C0L4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.08■■■□□ 2.41
C4AP0C0L4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.08■■■□□ 2.41
C4AP0C0L4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.08■■■□□ 2.41
C4AP0C0L4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
C4AP0C0L4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
C4AP0C0L4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.08■■■□□ 2.41
C4AP0C0L4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.08■■■□□ 2.41
C4AP0C0L4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
C4AP0C0L4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.08■■■□□ 2.41
C4AP0C0L4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
C4AP0C0L4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
C4AP0C0L4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.07■■■□□ 2.4
C4AP0C0L4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.07■■■□□ 2.4
C4AP0C0L4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.07■■■□□ 2.4
C4AP0C0L4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
C4AP0C0L4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
C4AP0C0L4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.06■■■□□ 2.4
C4AP0C0L4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
C4AP0C0L4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
C4AP0C0L4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
C4AP0C0L4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
C4AP0C0L4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.05■■■□□ 2.4
C4AP0C0L4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
C4AP0C0L4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
C4AP0C0L4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.05■■■□□ 2.4
C4AP0C0L4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
C4AP0C0L4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.04■■■□□ 2.4
C4AP0C0L4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
C4AP0C0L4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms