Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPLP0P05388 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.06■■□□□ 1.28
RPLP0P05388 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPLP0P05388 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPLP0P05388 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.06■■□□□ 1.28
RPLP0P05388 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPLP0P05388 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPLP0P05388 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPLP0P05388 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.05■■□□□ 1.28
RPLP0P05388 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPLP0P05388 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPLP0P05388 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.05■■□□□ 1.28
RPLP0P05388 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.05■■□□□ 1.28
RPLP0P05388 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPLP0P05388 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPLP0P05388 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPLP0P05388 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPLP0P05388 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPLP0P05388 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPLP0P05388 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.04■■□□□ 1.28
RPLP0P05388 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPLP0P05388 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.04■■□□□ 1.28
RPLP0P05388 UNC93B8-201ENST00000511903 705 ntBASIC23.04■■□□□ 1.28
RPLP0P05388 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.04■■□□□ 1.28
RPLP0P05388 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.03■■□□□ 1.28
RPLP0P05388 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.03■■□□□ 1.28
RPLP0P05388 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
RPLP0P05388 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPLP0P05388 KRT16P3-201ENST00000439127 1283 ntBASIC23.03■■□□□ 1.28
RPLP0P05388 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.03■■□□□ 1.28
RPLP0P05388 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.03■■□□□ 1.28
RPLP0P05388 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.03■■□□□ 1.28
RPLP0P05388 AC137630.3-201ENST00000607245 391 ntBASIC23.03■■□□□ 1.28
RPLP0P05388 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RPLP0P05388 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPLP0P05388 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPLP0P05388 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.02■■□□□ 1.28
RPLP0P05388 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPLP0P05388 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.02■■□□□ 1.28
RPLP0P05388 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RPLP0P05388 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RPLP0P05388 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPLP0P05388 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RPLP0P05388 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPLP0P05388 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPLP0P05388 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RPLP0P05388 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPLP0P05388 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RPLP0P05388 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.01■■□□□ 1.27
RPLP0P05388 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
RPLP0P05388 TSPY9P-201ENST00000440215 945 ntBASIC23.01■■□□□ 1.27
RPLP0P05388 TSPY11P-201ENST00000442607 1045 ntBASIC23.01■■□□□ 1.27
RPLP0P05388 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPLP0P05388 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.01■■□□□ 1.27
RPLP0P05388 AC019069.1-201ENST00000610008 1333 ntBASIC23.01■■□□□ 1.27
RPLP0P05388 AC008406.3-201ENST00000620001 1374 ntBASIC23.01■■□□□ 1.27
RPLP0P05388 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23■■□□□ 1.27
RPLP0P05388 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23■■□□□ 1.27
RPLP0P05388 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23■■□□□ 1.27
RPLP0P05388 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RPLP0P05388 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPLP0P05388 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPLP0P05388 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
RPLP0P05388 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RPLP0P05388 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RPLP0P05388 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.99■■□□□ 1.27
RPLP0P05388 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.99■■□□□ 1.27
RPLP0P05388 AC021242.3-201ENST00000607598 1377 ntBASIC22.99■■□□□ 1.27
RPLP0P05388 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RPLP0P05388 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
RPLP0P05388 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPLP0P05388 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPLP0P05388 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.98■■□□□ 1.27
RPLP0P05388 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RPLP0P05388 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
RPLP0P05388 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.97■■□□□ 1.27
RPLP0P05388 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPLP0P05388 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPLP0P05388 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RPLP0P05388 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
RPLP0P05388 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPLP0P05388 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.97■■□□□ 1.27
RPLP0P05388 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RPLP0P05388 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPLP0P05388 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPLP0P05388 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.96■■□□□ 1.27
RPLP0P05388 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RPLP0P05388 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
RPLP0P05388 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.96■■□□□ 1.27
RPLP0P05388 MIR4281-201ENST00000580852 62 ntBASIC22.96■■□□□ 1.27
RPLP0P05388 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
RPLP0P05388 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RPLP0P05388 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPLP0P05388 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RPLP0P05388 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.95■■□□□ 1.26
RPLP0P05388 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.95■■□□□ 1.26
RPLP0P05388 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.95■■□□□ 1.26
RPLP0P05388 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.94■■□□□ 1.26
RPLP0P05388 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.94■■□□□ 1.26
RPLP0P05388 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms