Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBP04435 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBP04435 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.07■□□□□ 0.8
TCRBP04435 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBP04435 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBP04435 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
TCRBP04435 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBP04435 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.06■□□□□ 0.8
TCRBP04435 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBP04435 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.06■□□□□ 0.8
TCRBP04435 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.06■□□□□ 0.8
TCRBP04435 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TCRBP04435 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
TCRBP04435 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBP04435 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBP04435 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBP04435 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TCRBP04435 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TCRBP04435 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBP04435 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TCRBP04435 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TCRBP04435 AC233723.2-201ENST00000623798 2106 ntBASIC20.05■□□□□ 0.8
TCRBP04435 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBP04435 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TCRBP04435 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.04■□□□□ 0.8
TCRBP04435 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBP04435 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.04■□□□□ 0.8
TCRBP04435 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBP04435 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.04■□□□□ 0.8
TCRBP04435 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.04■□□□□ 0.8
TCRBP04435 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TCRBP04435 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBP04435 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBP04435 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TCRBP04435 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.03■□□□□ 0.8
TCRBP04435 AC108673.1-201ENST00000510422 1159 ntBASIC20.03■□□□□ 0.8
TCRBP04435 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBP04435 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBP04435 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBP04435 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBP04435 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBP04435 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBP04435 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBP04435 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBP04435 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBP04435 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBP04435 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TCRBP04435 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.02■□□□□ 0.8
TCRBP04435 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.02■□□□□ 0.8
TCRBP04435 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBP04435 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBP04435 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBP04435 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBP04435 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBP04435 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.01■□□□□ 0.79
TCRBP04435 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.01■□□□□ 0.79
TCRBP04435 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TCRBP04435 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TCRBP04435 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBP04435 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBP04435 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBP04435 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBP04435 RARRES2P7-201ENST00000567349 469 ntBASIC20■□□□□ 0.79
TCRBP04435 CAHM-201ENST00000604200 896 ntBASIC20■□□□□ 0.79
TCRBP04435 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBP04435 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBP04435 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TCRBP04435 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBP04435 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBP04435 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBP04435 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20■□□□□ 0.79
TCRBP04435 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TCRBP04435 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20■□□□□ 0.79
TCRBP04435 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.99■□□□□ 0.79
TCRBP04435 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TCRBP04435 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBP04435 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TCRBP04435 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBP04435 AL024507.2-201ENST00000606070 2574 ntBASIC19.98■□□□□ 0.79
TCRBP04435 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBP04435 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBP04435 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBP04435 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBP04435 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBP04435 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBP04435 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.98■□□□□ 0.79
TCRBP04435 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBP04435 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.98■□□□□ 0.79
TCRBP04435 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBP04435 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TCRBP04435 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.97■□□□□ 0.79
TCRBP04435 MIR762-201ENST00000390236 83 ntBASIC19.97■□□□□ 0.79
TCRBP04435 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.97■□□□□ 0.79
TCRBP04435 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.97■□□□□ 0.79
TCRBP04435 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TCRBP04435 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms