Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
PCF11O94913 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC37.37■■■■□ 3.57
PCF11O94913 AC131281.2-201ENST00000520478 145 ntBASIC37.37■■■■□ 3.57
PCF11O94913 GAK-223ENST00000628912 497 ntTSL 5 BASIC37.37■■■■□ 3.57
PCF11O94913 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC37.37■■■■□ 3.57
PCF11O94913 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
PCF11O94913 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC37.36■■■■□ 3.57
PCF11O94913 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC37.36■■■■□ 3.57
PCF11O94913 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
PCF11O94913 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC37.35■■■■□ 3.57
PCF11O94913 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC37.35■■■■□ 3.57
PCF11O94913 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
PCF11O94913 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
PCF11O94913 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC37.34■■■■□ 3.57
PCF11O94913 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC37.34■■■■□ 3.57
PCF11O94913 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
PCF11O94913 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
PCF11O94913 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC37.34■■■■□ 3.57
PCF11O94913 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC37.34■■■■□ 3.57
PCF11O94913 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
PCF11O94913 AF131216.4-201ENST00000638924 1588 ntBASIC37.33■■■■□ 3.57
PCF11O94913 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
PCF11O94913 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
PCF11O94913 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC37.33■■■■□ 3.57
PCF11O94913 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC37.33■■■■□ 3.57
PCF11O94913 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
PCF11O94913 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.57
PCF11O94913 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC37.32■■■■□ 3.57
PCF11O94913 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC37.32■■■■□ 3.57
PCF11O94913 AC092028.1-203ENST00000608262 953 ntBASIC37.32■■■■□ 3.56
PCF11O94913 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC37.32■■■■□ 3.56
PCF11O94913 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
PCF11O94913 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC37.31■■■■□ 3.56
PCF11O94913 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC37.31■■■■□ 3.56
PCF11O94913 FOXO3B-201ENST00000395675 1928 ntBASIC37.31■■■■□ 3.56
PCF11O94913 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
PCF11O94913 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC37.3■■■■□ 3.56
PCF11O94913 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
PCF11O94913 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC37.29■■■■□ 3.56
PCF11O94913 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC37.29■■■■□ 3.56
PCF11O94913 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC37.29■■■■□ 3.56
PCF11O94913 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC37.28■■■■□ 3.56
PCF11O94913 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
PCF11O94913 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC37.28■■■■□ 3.56
PCF11O94913 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
PCF11O94913 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
PCF11O94913 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
PCF11O94913 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
PCF11O94913 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC37.27■■■■□ 3.56
PCF11O94913 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC37.27■■■■□ 3.56
PCF11O94913 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC37.27■■■■□ 3.56
PCF11O94913 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC37.27■■■■□ 3.56
PCF11O94913 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
PCF11O94913 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC37.26■■■■□ 3.56
PCF11O94913 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC37.26■■■■□ 3.56
PCF11O94913 AL117332.1-201ENST00000622628 974 ntBASIC37.26■■■■□ 3.56
PCF11O94913 AC010501.1-201ENST00000606270 1962 ntBASIC37.26■■■■□ 3.56
PCF11O94913 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC37.26■■■■□ 3.56
PCF11O94913 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
PCF11O94913 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
PCF11O94913 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC37.25■■■■□ 3.55
PCF11O94913 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC37.24■■■■□ 3.55
PCF11O94913 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC37.24■■■■□ 3.55
PCF11O94913 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC37.24■■■■□ 3.55
PCF11O94913 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC37.23■■■■□ 3.55
PCF11O94913 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC37.23■■■■□ 3.55
PCF11O94913 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC37.23■■■■□ 3.55
PCF11O94913 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC37.23■■■■□ 3.55
PCF11O94913 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC37.23■■■■□ 3.55
PCF11O94913 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
PCF11O94913 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC37.22■■■■□ 3.55
PCF11O94913 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC37.22■■■■□ 3.55
PCF11O94913 TRIR-202ENST00000588213 841 ntTSL 3 BASIC37.22■■■■□ 3.55
PCF11O94913 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
PCF11O94913 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
PCF11O94913 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
PCF11O94913 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
PCF11O94913 RALB-208ENST00000631312 311 ntTSL 5 BASIC37.21■■■■□ 3.55
PCF11O94913 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
PCF11O94913 MTDHP2-201ENST00000601468 714 ntBASIC37.21■■■■□ 3.55
PCF11O94913 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
PCF11O94913 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC37.19■■■■□ 3.54
PCF11O94913 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
PCF11O94913 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
PCF11O94913 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC37.19■■■■□ 3.54
PCF11O94913 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC37.18■■■■□ 3.54
PCF11O94913 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
PCF11O94913 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
PCF11O94913 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
PCF11O94913 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
PCF11O94913 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC37.17■■■■□ 3.54
PCF11O94913 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC37.17■■■■□ 3.54
PCF11O94913 SSSCA1-AS1-201ENST00000567594 614 ntBASIC37.17■■■■□ 3.54
PCF11O94913 AL139246.5-201ENST00000606645 996 ntBASIC37.17■■■■□ 3.54
PCF11O94913 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
PCF11O94913 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
PCF11O94913 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC37.17■■■■□ 3.54
PCF11O94913 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC37.17■■■■□ 3.54
PCF11O94913 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
PCF11O94913 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms