Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 AC126177.7-201ENST00000547904 679 ntBASIC20.01■□□□□ 0.79
TSPAN9O75954 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TSPAN9O75954 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN9O75954 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN9O75954 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20■□□□□ 0.79
TSPAN9O75954 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TSPAN9O75954 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN9O75954 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN9O75954 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20■□□□□ 0.79
TSPAN9O75954 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TSPAN9O75954 AC091060.1-201ENST00000623524 1766 ntBASIC20■□□□□ 0.79
TSPAN9O75954 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TSPAN9O75954 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.99■□□□□ 0.79
TSPAN9O75954 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN9O75954 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN9O75954 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TSPAN9O75954 AC092296.2-201ENST00000589470 999 ntBASIC19.99■□□□□ 0.79
TSPAN9O75954 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TSPAN9O75954 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN9O75954 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
TSPAN9O75954 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN9O75954 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN9O75954 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TSPAN9O75954 AC012354.3-201ENST00000623734 483 ntBASIC19.98■□□□□ 0.79
TSPAN9O75954 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN9O75954 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TSPAN9O75954 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.98■□□□□ 0.79
TSPAN9O75954 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN9O75954 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TSPAN9O75954 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TSPAN9O75954 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN9O75954 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.97■□□□□ 0.79
TSPAN9O75954 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.97■□□□□ 0.79
TSPAN9O75954 ECEL1P2-201ENST00000461596 1295 ntBASIC19.97■□□□□ 0.79
TSPAN9O75954 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN9O75954 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TSPAN9O75954 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TSPAN9O75954 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN9O75954 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN9O75954 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN9O75954 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.96■□□□□ 0.79
TSPAN9O75954 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN9O75954 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TSPAN9O75954 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN9O75954 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TSPAN9O75954 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.95■□□□□ 0.78
TSPAN9O75954 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TSPAN9O75954 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.95■□□□□ 0.78
TSPAN9O75954 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TSPAN9O75954 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN9O75954 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN9O75954 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TSPAN9O75954 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN9O75954 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN9O75954 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TSPAN9O75954 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN9O75954 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
TSPAN9O75954 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN9O75954 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.94■□□□□ 0.78
TSPAN9O75954 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN9O75954 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN9O75954 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TSPAN9O75954 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN9O75954 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.93■□□□□ 0.78
TSPAN9O75954 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TSPAN9O75954 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN9O75954 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.93■□□□□ 0.78
TSPAN9O75954 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN9O75954 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TSPAN9O75954 AC100797.4-201ENST00000631653 1827 ntBASIC19.92■□□□□ 0.78
TSPAN9O75954 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TSPAN9O75954 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.92■□□□□ 0.78
TSPAN9O75954 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.92■□□□□ 0.78
TSPAN9O75954 AC018358.1-201ENST00000631079 1402 ntBASIC19.92■□□□□ 0.78
TSPAN9O75954 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN9O75954 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN9O75954 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.91■□□□□ 0.78
TSPAN9O75954 U85056.1-201ENST00000616429 682 ntBASIC19.91■□□□□ 0.78
TSPAN9O75954 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN9O75954 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.91■□□□□ 0.78
TSPAN9O75954 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TSPAN9O75954 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.91■□□□□ 0.78
TSPAN9O75954 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TSPAN9O75954 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN9O75954 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.9■□□□□ 0.78
TSPAN9O75954 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.9■□□□□ 0.78
TSPAN9O75954 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN9O75954 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN9O75954 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN9O75954 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN9O75954 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.9■□□□□ 0.78
TSPAN9O75954 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TSPAN9O75954 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.9■□□□□ 0.78
TSPAN9O75954 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TSPAN9O75954 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TSPAN9O75954 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TSPAN9O75954 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TSPAN9O75954 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.89■□□□□ 0.77
TSPAN9O75954 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TSPAN9O75954 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms