Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
CHD1O14646 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC39.3■■■■□ 3.88
CHD1O14646 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC39.3■■■■□ 3.88
CHD1O14646 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
CHD1O14646 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
CHD1O14646 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC39.29■■■■□ 3.88
CHD1O14646 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC39.29■■■■□ 3.88
CHD1O14646 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
CHD1O14646 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC39.28■■■■□ 3.88
CHD1O14646 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC39.28■■■■□ 3.88
CHD1O14646 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
CHD1O14646 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
CHD1O14646 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC39.26■■■■□ 3.88
CHD1O14646 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC39.26■■■■□ 3.88
CHD1O14646 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC39.26■■■■□ 3.88
CHD1O14646 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC39.26■■■■□ 3.87
CHD1O14646 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC39.26■■■■□ 3.87
CHD1O14646 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.87
CHD1O14646 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.87
CHD1O14646 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC39.26■■■■□ 3.87
CHD1O14646 DENND3-207ENST00000518347 850 ntTSL 2 BASIC39.26■■■■□ 3.87
CHD1O14646 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC39.25■■■■□ 3.87
CHD1O14646 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
CHD1O14646 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC39.25■■■■□ 3.87
CHD1O14646 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC39.24■■■■□ 3.87
CHD1O14646 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC39.23■■■■□ 3.87
CHD1O14646 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
CHD1O14646 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC39.23■■■■□ 3.87
CHD1O14646 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC39.22■■■■□ 3.87
CHD1O14646 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC39.22■■■■□ 3.87
CHD1O14646 AC091305.1-201ENST00000479476 895 ntBASIC39.22■■■■□ 3.87
CHD1O14646 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
CHD1O14646 SF1-220ENST00000626028 704 ntTSL 2 BASIC39.21■■■■□ 3.87
CHD1O14646 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
CHD1O14646 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC39.2■■■■□ 3.87
CHD1O14646 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC39.2■■■■□ 3.87
CHD1O14646 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC39.2■■■■□ 3.87
CHD1O14646 PTMA-205ENST00000410064 814 ntTSL 2 BASIC39.2■■■■□ 3.87
CHD1O14646 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC39.18■■■■□ 3.86
CHD1O14646 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC39.17■■■■□ 3.86
CHD1O14646 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
CHD1O14646 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
CHD1O14646 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
CHD1O14646 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC39.17■■■■□ 3.86
CHD1O14646 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC39.16■■■■□ 3.86
CHD1O14646 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC39.16■■■■□ 3.86
CHD1O14646 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
CHD1O14646 SRD5A1P1-201ENST00000442297 786 ntBASIC39.16■■■■□ 3.86
CHD1O14646 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC39.16■■■■□ 3.86
CHD1O14646 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC39.16■■■■□ 3.86
CHD1O14646 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC39.15■■■■□ 3.86
CHD1O14646 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC39.15■■■■□ 3.86
CHD1O14646 CA15P2-201ENST00000611168 834 ntBASIC39.14■■■■□ 3.86
CHD1O14646 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC39.14■■■■□ 3.86
CHD1O14646 AL449106.1-201ENST00000608517 1980 ntBASIC39.13■■■■□ 3.85
CHD1O14646 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC39.13■■■■□ 3.85
CHD1O14646 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC39.13■■■■□ 3.85
CHD1O14646 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC39.13■■■■□ 3.85
CHD1O14646 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
CHD1O14646 HACD1-201ENST00000326961 773 ntTSL 2 BASIC39.12■■■■□ 3.85
CHD1O14646 MAG-206ENST00000597035 542 ntTSL 4 BASIC39.12■■■■□ 3.85
CHD1O14646 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC39.12■■■■□ 3.85
CHD1O14646 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC39.11■■■■□ 3.85
CHD1O14646 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC39.11■■■■□ 3.85
CHD1O14646 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC39.11■■■■□ 3.85
CHD1O14646 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC39.1■■■■□ 3.85
CHD1O14646 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
CHD1O14646 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC39.1■■■■□ 3.85
CHD1O14646 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC39.1■■■■□ 3.85
CHD1O14646 GATM-206ENST00000558336 1522 ntTSL 2 BASIC39.1■■■■□ 3.85
CHD1O14646 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC39.1■■■■□ 3.85
CHD1O14646 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC39.09■■■■□ 3.85
CHD1O14646 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC39.09■■■■□ 3.85
CHD1O14646 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC39.09■■■■□ 3.85
CHD1O14646 AC092437.1-201ENST00000624794 1048 ntBASIC39.09■■■■□ 3.85
CHD1O14646 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
CHD1O14646 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
CHD1O14646 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
CHD1O14646 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC39.08■■■■□ 3.85
CHD1O14646 MIR4767-201ENST00000582827 78 ntBASIC39.08■■■■□ 3.85
CHD1O14646 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC39.06■■■■□ 3.84
CHD1O14646 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC39.06■■■■□ 3.84
CHD1O14646 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
CHD1O14646 RASA4CP-201ENST00000424092 1398 ntBASIC39.05■■■■□ 3.84
CHD1O14646 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
CHD1O14646 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC39.05■■■■□ 3.84
CHD1O14646 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
CHD1O14646 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC39.04■■■■□ 3.84
CHD1O14646 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC39.04■■■■□ 3.84
CHD1O14646 KRT18P5-201ENST00000436075 1291 ntBASIC39.04■■■■□ 3.84
CHD1O14646 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
CHD1O14646 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC39.04■■■■□ 3.84
CHD1O14646 JTB-203ENST00000368589 1216 ntTSL 2 BASIC39.03■■■■□ 3.84
CHD1O14646 AC027682.1-201ENST00000562846 899 ntBASIC39.03■■■■□ 3.84
CHD1O14646 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC39.03■■■■□ 3.84
CHD1O14646 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC39.02■■■■□ 3.84
CHD1O14646 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC39.02■■■■□ 3.84
CHD1O14646 MIR6722-201ENST00000617286 78 ntBASIC39.02■■■■□ 3.84
CHD1O14646 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC39.01■■■■□ 3.84
CHD1O14646 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC39.01■■■■□ 3.84
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms