Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.98■■□□□ 1.27
UBFD1O14562 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.98■■□□□ 1.27
UBFD1O14562 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
UBFD1O14562 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
UBFD1O14562 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBFD1O14562 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
UBFD1O14562 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.97■■□□□ 1.27
UBFD1O14562 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.97■■□□□ 1.27
UBFD1O14562 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBFD1O14562 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
UBFD1O14562 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBFD1O14562 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBFD1O14562 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBFD1O14562 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
UBFD1O14562 AC093536.1-201ENST00000569153 554 ntBASIC22.96■■□□□ 1.27
UBFD1O14562 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
UBFD1O14562 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.96■■□□□ 1.27
UBFD1O14562 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
UBFD1O14562 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBFD1O14562 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UBFD1O14562 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
UBFD1O14562 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.95■■□□□ 1.26
UBFD1O14562 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UBFD1O14562 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
UBFD1O14562 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.95■■□□□ 1.26
UBFD1O14562 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBFD1O14562 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBFD1O14562 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBFD1O14562 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.94■■□□□ 1.26
UBFD1O14562 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.94■■□□□ 1.26
UBFD1O14562 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
UBFD1O14562 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.93■■□□□ 1.26
UBFD1O14562 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.93■■□□□ 1.26
UBFD1O14562 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
UBFD1O14562 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBFD1O14562 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
UBFD1O14562 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
UBFD1O14562 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBFD1O14562 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
UBFD1O14562 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
UBFD1O14562 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.92■■□□□ 1.26
UBFD1O14562 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.92■■□□□ 1.26
UBFD1O14562 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.92■■□□□ 1.26
UBFD1O14562 MIR6089-201ENST00000616698 64 ntBASIC22.92■■□□□ 1.26
UBFD1O14562 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBFD1O14562 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBFD1O14562 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
UBFD1O14562 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
UBFD1O14562 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
UBFD1O14562 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.91■■□□□ 1.26
UBFD1O14562 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBFD1O14562 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBFD1O14562 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
UBFD1O14562 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.91■■□□□ 1.26
UBFD1O14562 AC007029.1-201ENST00000604183 313 ntBASIC22.91■■□□□ 1.26
UBFD1O14562 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBFD1O14562 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
UBFD1O14562 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
UBFD1O14562 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBFD1O14562 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBFD1O14562 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.9■■□□□ 1.26
UBFD1O14562 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.9■■□□□ 1.26
UBFD1O14562 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
UBFD1O14562 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBFD1O14562 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.9■■□□□ 1.26
UBFD1O14562 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
UBFD1O14562 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.89■■□□□ 1.25
UBFD1O14562 AC004812.2-201ENST00000611079 2094 ntBASIC22.89■■□□□ 1.25
UBFD1O14562 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.25
UBFD1O14562 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.89■■□□□ 1.25
UBFD1O14562 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.89■■□□□ 1.25
UBFD1O14562 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UBFD1O14562 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
UBFD1O14562 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
UBFD1O14562 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
UBFD1O14562 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
UBFD1O14562 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
UBFD1O14562 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.89■■□□□ 1.25
UBFD1O14562 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.89■■□□□ 1.25
UBFD1O14562 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
UBFD1O14562 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
UBFD1O14562 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.88■■□□□ 1.25
UBFD1O14562 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.88■■□□□ 1.25
UBFD1O14562 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.88■■□□□ 1.25
UBFD1O14562 RAP2CP1-202ENST00000605179 643 ntBASIC22.88■■□□□ 1.25
UBFD1O14562 AC141586.4-201ENST00000624558 1573 ntBASIC22.88■■□□□ 1.25
UBFD1O14562 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
UBFD1O14562 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
UBFD1O14562 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
UBFD1O14562 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
UBFD1O14562 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UBFD1O14562 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
UBFD1O14562 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
UBFD1O14562 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UBFD1O14562 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
UBFD1O14562 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.85■■□□□ 1.25
UBFD1O14562 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
UBFD1O14562 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
UBFD1O14562 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
UBFD1O14562 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms