Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 AP003733.4-201ENST00000623785 1697 ntBASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 AP002365.1-201ENST00000603448 772 ntBASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00854A0A1B0GVQ3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00854A0A1B0GVQ3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.64■□□□□ 0.9
LINC00854A0A1B0GVQ3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC00854A0A1B0GVQ3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00854A0A1B0GVQ3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC00854A0A1B0GVQ3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00854A0A1B0GVQ3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 AL117328.2-201ENST00000624617 1940 ntBASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 LINC00565-201ENST00000562710 2331 ntBASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.58■□□□□ 0.88
LINC00854A0A1B0GVQ3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINC00854A0A1B0GVQ3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINC00854A0A1B0GVQ3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 EP400NL-214ENST00000641289 2402 ntBASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms