Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 AP003733.4-201ENST00000623785 1697 ntBASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00854A0A1B0GVQ3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 AP002365.1-201ENST00000603448 772 ntBASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00854A0A1B0GVQ3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00854A0A1B0GVQ3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00854A0A1B0GVQ3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.64■□□□□ 0.9
LINC00854A0A1B0GVQ3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00854A0A1B0GVQ3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LINC00854A0A1B0GVQ3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00854A0A1B0GVQ3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC00854A0A1B0GVQ3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00854A0A1B0GVQ3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.61■□□□□ 0.89
LINC00854A0A1B0GVQ3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00854A0A1B0GVQ3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00854A0A1B0GVQ3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 AL117328.2-201ENST00000624617 1940 ntBASIC20.59■□□□□ 0.89
LINC00854A0A1B0GVQ3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 LINC00565-201ENST00000562710 2331 ntBASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00854A0A1B0GVQ3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.58■□□□□ 0.88
LINC00854A0A1B0GVQ3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINC00854A0A1B0GVQ3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINC00854A0A1B0GVQ3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.57■□□□□ 0.88
LINC00854A0A1B0GVQ3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 EP400NL-214ENST00000641289 2402 ntBASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00854A0A1B0GVQ3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms