Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRAV2A0A0B4J234 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 AC004987.1-201ENST00000428627 508 ntBASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 AC139795.1-202ENST00000500444 432 ntBASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV2A0A0B4J234 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV2A0A0B4J234 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV2A0A0B4J234 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV2A0A0B4J234 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV2A0A0B4J234 LONRF2P2-201ENST00000439212 571 ntBASIC17.73■□□□□ 0.43
TRAV2A0A0B4J234 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV2A0A0B4J234 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.73■□□□□ 0.43
TRAV2A0A0B4J234 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 AL592295.1-201ENST00000400984 884 ntBASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRAV2A0A0B4J234 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 FOXO3B-201ENST00000395675 1928 ntBASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 AC022616.5-201ENST00000518796 181 ntBASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV2A0A0B4J234 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV2A0A0B4J234 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV2A0A0B4J234 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAV2A0A0B4J234 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAV2A0A0B4J234 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV2A0A0B4J234 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRAV2A0A0B4J234 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV2A0A0B4J234 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV2A0A0B4J234 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 DUX4L18-201ENST00000553347 1267 ntBASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV2A0A0B4J234 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 AC142381.3-201ENST00000568208 1670 ntBASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 MIR6089-201ENST00000616698 64 ntBASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV2A0A0B4J234 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 SLC6A10P-202ENST00000431994 2058 ntBASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV2A0A0B4J234 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV2A0A0B4J234 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms