Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-8A0A0A6YYG3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-8A0A0A6YYG3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-8A0A0A6YYG3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-8A0A0A6YYG3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 AC026202.3-201ENST00000600805 1127 ntBASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-8A0A0A6YYG3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-8A0A0A6YYG3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 LINC01124-201ENST00000409786 2117 ntBASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-8A0A0A6YYG3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-8A0A0A6YYG3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV6-8A0A0A6YYG3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV6-8A0A0A6YYG3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV6-8A0A0A6YYG3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 RNF126P1-201ENST00000567452 1320 ntBASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV6-8A0A0A6YYG3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-8A0A0A6YYG3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-8A0A0A6YYG3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-8A0A0A6YYG3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-8A0A0A6YYG3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV6-8A0A0A6YYG3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV6-8A0A0A6YYG3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRBV6-8A0A0A6YYG3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV6-8A0A0A6YYG3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
TRBV6-8A0A0A6YYG3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-8A0A0A6YYG3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-8A0A0A6YYG3 MIR6089-201ENST00000616698 64 ntBASIC16.33■□□□□ 0.2
TRBV6-8A0A0A6YYG3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-8A0A0A6YYG3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV6-8A0A0A6YYG3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-8A0A0A6YYG3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-8A0A0A6YYG3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV6-8A0A0A6YYG3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-8A0A0A6YYG3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV6-8A0A0A6YYG3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AC009831.1-201ENST00000580420 1582 ntBASIC16.32■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AC133552.2-201ENST00000619106 1032 ntBASIC16.32■□□□□ 0.2
TRBV6-8A0A0A6YYG3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 LINC00543-201ENST00000567234 1845 ntBASIC16.31■□□□□ 0.2
TRBV6-8A0A0A6YYG3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AC141586.4-201ENST00000624558 1573 ntBASIC16.3■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 FOXO3B-201ENST00000395675 1928 ntBASIC16.29■□□□□ 0.2
TRBV6-8A0A0A6YYG3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms