Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV6-7A0A0A0MS04 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.73■□□□□ 0.75
TRBV6-7A0A0A0MS04 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV6-7A0A0A0MS04 AL157400.5-201ENST00000507624 621 ntBASIC19.73■□□□□ 0.75
TRBV6-7A0A0A0MS04 AC025884.2-201ENST00000553429 711 ntBASIC19.73■□□□□ 0.75
TRBV6-7A0A0A0MS04 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV6-7A0A0A0MS04 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV6-7A0A0A0MS04 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV6-7A0A0A0MS04 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV6-7A0A0A0MS04 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 DUSP8P5-201ENST00000422884 1815 ntBASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-7A0A0A0MS04 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV6-7A0A0A0MS04 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.7■□□□□ 0.74
TRBV6-7A0A0A0MS04 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
TRBV6-7A0A0A0MS04 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV6-7A0A0A0MS04 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV6-7A0A0A0MS04 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV6-7A0A0A0MS04 AC060814.1-201ENST00000554326 538 ntBASIC19.69■□□□□ 0.74
TRBV6-7A0A0A0MS04 MIR3960-201ENST00000583311 91 ntBASIC19.69■□□□□ 0.74
TRBV6-7A0A0A0MS04 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV6-7A0A0A0MS04 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV6-7A0A0A0MS04 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV6-7A0A0A0MS04 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV6-7A0A0A0MS04 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV6-7A0A0A0MS04 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBV6-7A0A0A0MS04 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV6-7A0A0A0MS04 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV6-7A0A0A0MS04 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TRBV6-7A0A0A0MS04 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV6-7A0A0A0MS04 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV6-7A0A0A0MS04 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV6-7A0A0A0MS04 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV6-7A0A0A0MS04 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-7A0A0A0MS04 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRBV6-7A0A0A0MS04 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-7A0A0A0MS04 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-7A0A0A0MS04 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-7A0A0A0MS04 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TRBV6-7A0A0A0MS04 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-7A0A0A0MS04 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV6-7A0A0A0MS04 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV6-7A0A0A0MS04 SMPD5-203ENST00000639008 1464 ntBASIC19.65■□□□□ 0.74
TRBV6-7A0A0A0MS04 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRBV6-7A0A0A0MS04 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV6-7A0A0A0MS04 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV6-7A0A0A0MS04 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV6-7A0A0A0MS04 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms