Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 AC004461.1-201ENST00000412461 403 ntBASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 RPS8P6-201ENST00000426177 609 ntBASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 ME2P1-201ENST00000426028 1970 ntBASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 AC005622.1-201ENST00000636801 1703 ntBASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
PARPBPQ9NWS1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 MIR346-201ENST00000362234 95 ntBASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AC093724.1-201ENST00000448659 1027 ntBASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 DNAJB3-202ENST00000449667 1266 ntBASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AC098859.1-201ENST00000502915 1238 ntBASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 LINC01225-203ENST00000563550 1244 ntBASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AL596442.2-201ENST00000610240 980 ntBASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AC084121.4-201ENST00000641598 221 ntBASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AF228730.8-201ENST00000642140 221 ntBASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.57□□□□□ -0.08
PARPBPQ9NWS1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms