Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.41□□□□□ -0.1
COMMD4Q9H0A8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 LAGE3P1-201ENST00000425356 484 ntBASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 AL121772.3-201ENST00000610840 674 ntBASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.4□□□□□ -0.1
COMMD4Q9H0A8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 FGFR3P6-201ENST00000457012 610 ntBASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 RPS15P9-201ENST00000494093 319 ntBASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 MIR3652-201ENST00000579335 131 ntBASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COMMD4Q9H0A8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
COMMD4Q9H0A8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms