Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 TNRC18P2-201ENST00000417666 2714 ntBASIC14.35□□□□□ -0.11
RAB40AQ8WXH6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 SNX33P1-201ENST00000592116 1762 ntBASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 AC073621.1-201ENST00000392730 636 ntBASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 UNC93B6-202ENST00000528242 690 ntBASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 AL139424.1-201ENST00000607572 797 ntBASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 AC069224.1-201ENST00000566372 1715 ntBASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40AQ8WXH6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 REXO1L8P-201ENST00000604378 1897 ntBASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 KRT8P39-201ENST00000396270 1433 ntBASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 PPT1-215ENST00000641471 2368 ntBASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.33□□□□□ -0.11
RAB40AQ8WXH6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 TERC-201ENST00000602385 541 ntBASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 AL671883.3-201ENST00000603274 991 ntBASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 PCGF3-213ENST00000620529 1899 ntBASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 TOP3BP1-201ENST00000420768 1380 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms