Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 CNN2P11-201ENST00000429351 262 ntBASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 METTL21AP1-201ENST00000438852 635 ntBASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 TIMM8BP1-201ENST00000452384 211 ntBASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 AC027796.2-201ENST00000575326 344 ntBASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH19Q8TAB3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 KRT18P28-201ENST00000453838 1332 ntBASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AL162727.3-201ENST00000635661 2787 ntBASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH19Q8TAB3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 PRAL-201ENST00000624952 3286 ntBASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDH19Q8TAB3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms