Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 AL031055.1-201ENST00000606362 631 ntBASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 AL732292.2-201ENST00000609649 430 ntBASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01561Q8N1V8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 AC073621.1-201ENST00000392730 636 ntBASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 KRT18P31-201ENST00000506277 1292 ntBASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 AC021087.4-201ENST00000563761 564 ntBASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 AL031432.2-201ENST00000566714 459 ntBASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 AL928711.1-201ENST00000570165 459 ntBASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 LINC01711-201ENST00000598340 967 ntBASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 REXO1L6P-202ENST00000619970 1078 ntBASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01561Q8N1V8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01561Q8N1V8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms