Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SSR4P1-203ENST00000599569 2260 ntBASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM42Q8IWZ5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
TRIM42Q8IWZ5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AL450487.1-201ENST00000426799 995 ntBASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 PMS2P1-201ENST00000431037 1228 ntBASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AC064862.7-201ENST00000604520 867 ntBASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AL022326.1-202ENST00000641533 845 ntBASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 AL365209.1-201ENST00000624418 6473 ntBASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM42Q8IWZ5 OR2I1P-210ENST00000642037 4691 ntBASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 AC005622.1-201ENST00000636801 1703 ntBASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM42Q8IWZ5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms