Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CROCCP3Q8IVE0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CROCCP3Q8IVE0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 MIR1238-201ENST00000408483 83 ntBASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 RASA4DP-201ENST00000460726 1199 ntBASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 STK19B-204ENST00000512515 211 ntBASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 DGCR9-201ENST00000609630 2415 ntBASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 GGT3P-204ENST00000453783 1664 ntBASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.77□□□□□ -0.05
CROCCP3Q8IVE0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 FGD5P1-202ENST00000614866 2498 ntBASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 ID1-201ENST00000376105 1233 ntBASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 AL390955.1-201ENST00000428694 934 ntBASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 HLA-F-220ENST00000434407 884 ntBASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 GPR32P1-201ENST00000601788 811 ntBASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CROCCP3Q8IVE0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms