Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 AC092171.3-201ENST00000610122 2651 ntBASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 AC007551.1-201ENST00000457394 519 ntBASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 MIR6069-201ENST00000620069 79 ntBASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
OTOP1Q7RTM1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
OTOP1Q7RTM1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
OTOP1Q7RTM1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
OTOP1Q7RTM1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 NKILA-202ENST00000614771 2598 ntBASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.64■□□□□ 0.57
OTOP1Q7RTM1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
OTOP1Q7RTM1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.62■□□□□ 0.57
OTOP1Q7RTM1 RARRES2P5-201ENST00000564013 466 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms