Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 AC002347.1-201ENST00000569543 541 ntBASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST2H3AQ71DI3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 AC069224.1-201ENST00000566372 1715 ntBASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 AC073389.1-201ENST00000595595 795 ntBASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 AL365330.1-201ENST00000607459 531 ntBASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 AL589702.1-201ENST00000641229 1509 ntBASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HIST2H3AQ71DI3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 CDC14C-201ENST00000428251 1719 ntBASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 AC112504.1-201ENST00000623415 1841 ntBASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 AC245100.5-201ENST00000452108 331 ntBASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 PRYP6-201ENST00000514804 343 ntBASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 RARRES2P8-201ENST00000566335 367 ntBASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST2H3AQ71DI3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms