Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.8■□□□□ 0.44
KRT9P35527 AL513480.1-201ENST00000451731 511 ntBASIC17.8■□□□□ 0.44
KRT9P35527 Z83851.2-201ENST00000609564 659 ntBASIC17.8■□□□□ 0.44
KRT9P35527 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT9P35527 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.8■□□□□ 0.44
KRT9P35527 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
KRT9P35527 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
KRT9P35527 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
KRT9P35527 PPT1-215ENST00000641471 2368 ntBASIC17.8■□□□□ 0.44
KRT9P35527 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.8■□□□□ 0.44
KRT9P35527 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KRT9P35527 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.8■□□□□ 0.44
KRT9P35527 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KRT9P35527 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT9P35527 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT9P35527 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT9P35527 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT9P35527 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT9P35527 FDX1P1-201ENST00000449115 551 ntBASIC17.79■□□□□ 0.44
KRT9P35527 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
KRT9P35527 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KRT9P35527 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT9P35527 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT9P35527 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT9P35527 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.79■□□□□ 0.44
KRT9P35527 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.79■□□□□ 0.44
KRT9P35527 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 MIR4515-201ENST00000584082 81 ntBASIC17.79■□□□□ 0.44
KRT9P35527 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT9P35527 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.79■□□□□ 0.44
KRT9P35527 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.79■□□□□ 0.44
KRT9P35527 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KRT9P35527 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KRT9P35527 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KRT9P35527 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT9P35527 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.78■□□□□ 0.44
KRT9P35527 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT9P35527 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
KRT9P35527 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.78■□□□□ 0.44
KRT9P35527 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KRT9P35527 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT9P35527 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.78■□□□□ 0.44
KRT9P35527 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.78■□□□□ 0.44
KRT9P35527 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
KRT9P35527 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KRT9P35527 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms