Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COL1A1P02452 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A1P02452 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A1P02452 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A1P02452 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
COL1A1P02452 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.27■□□□□ 0.67
COL1A1P02452 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A1P02452 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A1P02452 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.27■□□□□ 0.67
COL1A1P02452 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.27■□□□□ 0.67
COL1A1P02452 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.27■□□□□ 0.67
COL1A1P02452 MIR4525-201ENST00000580000 75 ntBASIC19.27■□□□□ 0.67
COL1A1P02452 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A1P02452 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
COL1A1P02452 AC133552.6-201ENST00000613406 534 ntBASIC19.27■□□□□ 0.67
COL1A1P02452 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A1P02452 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
COL1A1P02452 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A1P02452 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
COL1A1P02452 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.27■□□□□ 0.67
COL1A1P02452 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.26■□□□□ 0.67
COL1A1P02452 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.26■□□□□ 0.67
COL1A1P02452 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL1A1P02452 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
COL1A1P02452 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL1A1P02452 SLED1-202ENST00000512051 380 ntBASIC19.26■□□□□ 0.67
COL1A1P02452 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL1A1P02452 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.26■□□□□ 0.67
COL1A1P02452 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
COL1A1P02452 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.26■□□□□ 0.67
COL1A1P02452 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL1A1P02452 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A1P02452 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A1P02452 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
COL1A1P02452 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A1P02452 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A1P02452 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A1P02452 USP32P1-208ENST00000506594 1164 ntBASIC19.25■□□□□ 0.67
COL1A1P02452 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.25■□□□□ 0.67
COL1A1P02452 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A1P02452 MIR4259-201ENST00000584466 101 ntBASIC19.25■□□□□ 0.67
COL1A1P02452 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
COL1A1P02452 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
COL1A1P02452 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.25■□□□□ 0.67
COL1A1P02452 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A1P02452 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL1A1P02452 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A1P02452 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COL1A1P02452 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL1A1P02452 AL607033.1-201ENST00000623900 1599 ntBASIC19.24■□□□□ 0.67
COL1A1P02452 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
COL1A1P02452 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL1A1P02452 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.24■□□□□ 0.67
COL1A1P02452 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A1P02452 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A1P02452 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms