Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MT-CO1P00395 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MT-CO1P00395 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.66■□□□□ 0.26
MT-CO1P00395 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MT-CO1P00395 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MT-CO1P00395 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.66■□□□□ 0.26
MT-CO1P00395 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.66■□□□□ 0.26
MT-CO1P00395 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MT-CO1P00395 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-CO1P00395 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.66■□□□□ 0.26
MT-CO1P00395 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 AC018529.1-201ENST00000613063 361 ntBASIC16.66■□□□□ 0.26
MT-CO1P00395 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.66■□□□□ 0.26
MT-CO1P00395 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.66■□□□□ 0.26
MT-CO1P00395 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MT-CO1P00395 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-CO1P00395 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 AC006449.5-201ENST00000610658 2098 ntBASIC16.65■□□□□ 0.26
MT-CO1P00395 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
MT-CO1P00395 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 FAM220BP-201ENST00000377689 816 ntBASIC16.65■□□□□ 0.26
MT-CO1P00395 HLA-H-201ENST00000383620 1096 ntBASIC16.65■□□□□ 0.26
MT-CO1P00395 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.65■□□□□ 0.26
MT-CO1P00395 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 SPDYE7P-202ENST00000420373 878 ntBASIC16.65■□□□□ 0.26
MT-CO1P00395 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MT-CO1P00395 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-CO1P00395 AL390955.2-201ENST00000603032 514 ntBASIC16.65■□□□□ 0.26
MT-CO1P00395 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.65■□□□□ 0.26
MT-CO1P00395 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
MT-CO1P00395 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MT-CO1P00395 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MT-CO1P00395 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
MT-CO1P00395 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.64■□□□□ 0.26
MT-CO1P00395 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
MT-CO1P00395 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MT-CO1P00395 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MT-CO1P00395 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
MT-CO1P00395 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MT-CO1P00395 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.64■□□□□ 0.25
MT-CO1P00395 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 KLF2P3-201ENST00000451977 1087 ntBASIC16.64■□□□□ 0.25
MT-CO1P00395 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms