Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTNND1O60716 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNND1O60716 RN7SL399P-201ENST00000471648 279 ntBASIC18.84■□□□□ 0.61
CTNND1O60716 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNND1O60716 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNND1O60716 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNND1O60716 AC015936.2-201ENST00000593177 259 ntBASIC18.84■□□□□ 0.61
CTNND1O60716 AL391069.4-201ENST00000609583 481 ntBASIC18.84■□□□□ 0.61
CTNND1O60716 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNND1O60716 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNND1O60716 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNND1O60716 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.83■□□□□ 0.61
CTNND1O60716 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNND1O60716 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.83■□□□□ 0.61
CTNND1O60716 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTNND1O60716 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTNND1O60716 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTNND1O60716 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNND1O60716 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNND1O60716 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.83■□□□□ 0.61
CTNND1O60716 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTNND1O60716 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTNND1O60716 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CTNND1O60716 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.83■□□□□ 0.6
CTNND1O60716 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.83■□□□□ 0.6
CTNND1O60716 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.83■□□□□ 0.6
CTNND1O60716 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTNND1O60716 AC008735.3-201ENST00000596646 500 ntBASIC18.83■□□□□ 0.6
CTNND1O60716 LINC01115-203ENST00000606068 577 ntBASIC18.83■□□□□ 0.6
CTNND1O60716 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CTNND1O60716 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CTNND1O60716 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 HLA-A-202ENST00000376806 1854 ntBASIC18.83■□□□□ 0.6
CTNND1O60716 AP001094.4-201ENST00000579008 2176 ntBASIC18.83■□□□□ 0.6
CTNND1O60716 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.83■□□□□ 0.6
CTNND1O60716 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.83■□□□□ 0.6
CTNND1O60716 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CTNND1O60716 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTNND1O60716 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CTNND1O60716 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTNND1O60716 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNND1O60716 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.82■□□□□ 0.6
CTNND1O60716 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.82■□□□□ 0.6
CTNND1O60716 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.82■□□□□ 0.6
CTNND1O60716 AC245100.5-201ENST00000452108 331 ntBASIC18.82■□□□□ 0.6
CTNND1O60716 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.82■□□□□ 0.6
CTNND1O60716 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.82■□□□□ 0.6
CTNND1O60716 AC243562.2-201ENST00000561247 970 ntBASIC18.82■□□□□ 0.6
CTNND1O60716 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CTNND1O60716 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTNND1O60716 AL592424.1-201ENST00000563624 1536 ntBASIC18.82■□□□□ 0.6
CTNND1O60716 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CTNND1O60716 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.82■□□□□ 0.6
CTNND1O60716 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.82■□□□□ 0.6
CTNND1O60716 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.82■□□□□ 0.6
CTNND1O60716 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.82■□□□□ 0.6
CTNND1O60716 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNND1O60716 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNND1O60716 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTNND1O60716 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTNND1O60716 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTNND1O60716 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNND1O60716 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms