Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.52■□□□□ 0.24
RIPK2O43353 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.52■□□□□ 0.24
RIPK2O43353 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RIPK2O43353 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.52■□□□□ 0.24
RIPK2O43353 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RIPK2O43353 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
RIPK2O43353 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.52■□□□□ 0.24
RIPK2O43353 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RIPK2O43353 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RIPK2O43353 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.52■□□□□ 0.24
RIPK2O43353 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RIPK2O43353 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RIPK2O43353 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RIPK2O43353 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.52■□□□□ 0.24
RIPK2O43353 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.52■□□□□ 0.24
RIPK2O43353 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.52■□□□□ 0.24
RIPK2O43353 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
RIPK2O43353 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.52■□□□□ 0.24
RIPK2O43353 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.52■□□□□ 0.24
RIPK2O43353 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RIPK2O43353 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.52■□□□□ 0.24
RIPK2O43353 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RIPK2O43353 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RIPK2O43353 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RIPK2O43353 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
RIPK2O43353 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RIPK2O43353 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.52■□□□□ 0.23
RIPK2O43353 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RIPK2O43353 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RIPK2O43353 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RIPK2O43353 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.52■□□□□ 0.23
RIPK2O43353 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RIPK2O43353 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RIPK2O43353 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RIPK2O43353 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
RIPK2O43353 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
RIPK2O43353 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.51■□□□□ 0.23
RIPK2O43353 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RIPK2O43353 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RIPK2O43353 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.51■□□□□ 0.23
RIPK2O43353 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.51■□□□□ 0.23
RIPK2O43353 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.51■□□□□ 0.23
RIPK2O43353 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.51■□□□□ 0.23
RIPK2O43353 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.51■□□□□ 0.23
RIPK2O43353 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.51■□□□□ 0.23
RIPK2O43353 AC025062.2-201ENST00000605477 670 ntBASIC16.51■□□□□ 0.23
RIPK2O43353 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RIPK2O43353 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
RIPK2O43353 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RIPK2O43353 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.5■□□□□ 0.23
RIPK2O43353 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
RIPK2O43353 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.5■□□□□ 0.23
RIPK2O43353 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RIPK2O43353 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RIPK2O43353 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 AC112693.3-201ENST00000624819 1983 ntBASIC16.5■□□□□ 0.23
RIPK2O43353 AC091951.1-201ENST00000512854 2465 ntBASIC16.5■□□□□ 0.23
RIPK2O43353 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.5■□□□□ 0.23
RIPK2O43353 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 FOSL1P1-201ENST00000511041 816 ntBASIC16.5■□□□□ 0.23
RIPK2O43353 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.5■□□□□ 0.23
RIPK2O43353 AC006557.2-201ENST00000592985 1240 ntBASIC16.5■□□□□ 0.23
RIPK2O43353 AC021097.1-201ENST00000607902 574 ntBASIC16.5■□□□□ 0.23
RIPK2O43353 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 AP000550.4-202ENST00000639755 178 ntBASIC16.5■□□□□ 0.23
RIPK2O43353 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RIPK2O43353 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RIPK2O43353 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms