Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CASQ2O14958 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
CASQ2O14958 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CASQ2O14958 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CASQ2O14958 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CASQ2O14958 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.47■□□□□ 0.07
CASQ2O14958 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.47■□□□□ 0.07
CASQ2O14958 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 ECEL1P3-201ENST00000427961 737 ntBASIC15.47■□□□□ 0.07
CASQ2O14958 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.47■□□□□ 0.07
CASQ2O14958 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 AC008677.1-201ENST00000519230 1561 ntBASIC15.47■□□□□ 0.07
CASQ2O14958 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.47■□□□□ 0.07
CASQ2O14958 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASQ2O14958 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.47■□□□□ 0.07
CASQ2O14958 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CASQ2O14958 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CASQ2O14958 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.46■□□□□ 0.07
CASQ2O14958 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CASQ2O14958 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.46■□□□□ 0.07
CASQ2O14958 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.46■□□□□ 0.07
CASQ2O14958 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CASQ2O14958 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CASQ2O14958 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 PTENP1-202ENST00000532280 3996 ntBASIC15.46■□□□□ 0.07
CASQ2O14958 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CASQ2O14958 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CASQ2O14958 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CASQ2O14958 FAM87A-204ENST00000613235 858 ntBASIC15.46■□□□□ 0.07
CASQ2O14958 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.46■□□□□ 0.07
CASQ2O14958 AD001527.2-201ENST00000622994 785 ntBASIC15.46■□□□□ 0.07
CASQ2O14958 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 AL731571.1-201ENST00000617058 5428 ntBASIC15.46■□□□□ 0.07
CASQ2O14958 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CASQ2O14958 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CASQ2O14958 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CASQ2O14958 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.46■□□□□ 0.07
CASQ2O14958 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.46■□□□□ 0.07
CASQ2O14958 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.46■□□□□ 0.07
CASQ2O14958 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CASQ2O14958 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.46■□□□□ 0.07
CASQ2O14958 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CASQ2O14958 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.46■□□□□ 0.06
CASQ2O14958 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms