Protein–RNA interactions for Protein: O14813

PHOX2A, Paired mesoderm homeobox protein 2A, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2AO14813 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.58□□□□□ -0.4
PHOX2AO14813 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
PHOX2AO14813 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.58□□□□□ -0.4
PHOX2AO14813 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PHOX2AO14813 AL158047.1-201ENST00000445918 881 ntBASIC12.58□□□□□ -0.4
PHOX2AO14813 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PHOX2AO14813 AC098590.1-201ENST00000468126 897 ntBASIC12.58□□□□□ -0.4
PHOX2AO14813 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.58□□□□□ -0.4
PHOX2AO14813 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.58□□□□□ -0.4
PHOX2AO14813 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.58□□□□□ -0.4
PHOX2AO14813 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
PHOX2AO14813 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
PHOX2AO14813 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PHOX2AO14813 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.58□□□□□ -0.4
PHOX2AO14813 AC099521.3-201ENST00000624251 2938 ntBASIC12.58□□□□□ -0.4
PHOX2AO14813 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
PHOX2AO14813 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
PHOX2AO14813 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PHOX2AO14813 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.57□□□□□ -0.4
PHOX2AO14813 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.57□□□□□ -0.4
PHOX2AO14813 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.57□□□□□ -0.4
PHOX2AO14813 AC142381.4-202ENST00000563973 229 ntBASIC12.57□□□□□ -0.4
PHOX2AO14813 RN7SL471P-201ENST00000580476 299 ntBASIC12.57□□□□□ -0.4
PHOX2AO14813 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
PHOX2AO14813 AC066615.1-201ENST00000640911 628 ntBASIC12.57□□□□□ -0.4
PHOX2AO14813 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
PHOX2AO14813 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
PHOX2AO14813 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.57□□□□□ -0.4
PHOX2AO14813 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PHOX2AO14813 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.57□□□□□ -0.4
PHOX2AO14813 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PHOX2AO14813 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PHOX2AO14813 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PHOX2AO14813 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
PHOX2AO14813 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PHOX2AO14813 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PHOX2AO14813 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.56□□□□□ -0.4
PHOX2AO14813 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PHOX2AO14813 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PHOX2AO14813 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PHOX2AO14813 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms