Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 AL662844.1-201ENST00000546340 181 ntBASIC13.05□□□□□ -0.32
UPK2O00526 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.05□□□□□ -0.32
UPK2O00526 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UPK2O00526 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK2O00526 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
UPK2O00526 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK2O00526 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UPK2O00526 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
UPK2O00526 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK2O00526 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
UPK2O00526 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UPK2O00526 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK2O00526 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
UPK2O00526 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
UPK2O00526 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK2O00526 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
UPK2O00526 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK2O00526 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UPK2O00526 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.04□□□□□ -0.32
UPK2O00526 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.04□□□□□ -0.32
UPK2O00526 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.04□□□□□ -0.32
UPK2O00526 Z83851.2-201ENST00000609564 659 ntBASIC13.04□□□□□ -0.32
UPK2O00526 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.04□□□□□ -0.32
UPK2O00526 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.04□□□□□ -0.32
UPK2O00526 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UPK2O00526 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK2O00526 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 AC022532.1-201ENST00000624563 1728 ntBASIC13.04□□□□□ -0.32
UPK2O00526 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK2O00526 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UPK2O00526 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
UPK2O00526 AC126177.1-201ENST00000547829 2218 ntBASIC13.04□□□□□ -0.32
UPK2O00526 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK2O00526 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UPK2O00526 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
UPK2O00526 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 AC073439.1-201ENST00000624121 1774 ntBASIC13.03□□□□□ -0.32
UPK2O00526 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.03□□□□□ -0.32
UPK2O00526 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
UPK2O00526 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.03□□□□□ -0.32
UPK2O00526 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.03□□□□□ -0.32
UPK2O00526 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UPK2O00526 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.03□□□□□ -0.32
UPK2O00526 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UPK2O00526 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
UPK2O00526 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms