Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 AL031133.1-201ENST00000406807 723 ntBASIC14.17□□□□□ -0.14
SHISA3A0PJX4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 KRT18P35-201ENST00000510488 1269 ntBASIC14.17□□□□□ -0.14
SHISA3A0PJX4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 MIR3180-1-201ENST00000580374 94 ntBASIC14.17□□□□□ -0.14
SHISA3A0PJX4 MIR3180-3-201ENST00000584616 94 ntBASIC14.17□□□□□ -0.14
SHISA3A0PJX4 AL445228.2-201ENST00000605589 952 ntBASIC14.17□□□□□ -0.14
SHISA3A0PJX4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHISA3A0PJX4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 NUS1P2-201ENST00000417358 873 ntBASIC14.16□□□□□ -0.14
SHISA3A0PJX4 HCG4-201ENST00000418983 998 ntBASIC14.16□□□□□ -0.14
SHISA3A0PJX4 AC132008.2-207ENST00000454517 770 ntBASIC14.16□□□□□ -0.14
SHISA3A0PJX4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 AC005412.3-201ENST00000580309 715 ntBASIC14.16□□□□□ -0.14
SHISA3A0PJX4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHISA3A0PJX4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.15□□□□□ -0.14
SHISA3A0PJX4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms