Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
DDX11Q96FC9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.33■□□□□ 0.68
DDX11Q96FC9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
DDX11Q96FC9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.33■□□□□ 0.68
DDX11Q96FC9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 FAM58DP-201ENST00000428076 619 ntBASIC19.32■□□□□ 0.68
DDX11Q96FC9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 AC015911.4-201ENST00000588022 1070 ntBASIC19.32■□□□□ 0.68
DDX11Q96FC9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.32■□□□□ 0.68
DDX11Q96FC9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDX11Q96FC9 MTHFR-217ENST00000641820 1569 ntBASIC19.32■□□□□ 0.68
DDX11Q96FC9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 SPCS2P4-201ENST00000436160 681 ntBASIC19.31■□□□□ 0.68
DDX11Q96FC9 CNN2P2-201ENST00000443536 909 ntBASIC19.31■□□□□ 0.68
DDX11Q96FC9 CNN2P3-201ENST00000450201 906 ntBASIC19.31■□□□□ 0.68
DDX11Q96FC9 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.31■□□□□ 0.68
DDX11Q96FC9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 DUX4L27-201ENST00000554796 1261 ntBASIC19.31■□□□□ 0.68
DDX11Q96FC9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 AL136317.3-201ENST00000618497 906 ntBASIC19.31■□□□□ 0.68
DDX11Q96FC9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.31■□□□□ 0.68
DDX11Q96FC9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDX11Q96FC9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 RNU1-129P-201ENST00000384064 167 ntBASIC19.3■□□□□ 0.68
DDX11Q96FC9 AC092474.2-201ENST00000424288 719 ntBASIC19.3■□□□□ 0.68
DDX11Q96FC9 RBPMS2P1-201ENST00000437762 623 ntBASIC19.3■□□□□ 0.68
DDX11Q96FC9 U1.21-201ENST00000580816 167 ntBASIC19.3■□□□□ 0.68
DDX11Q96FC9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX11Q96FC9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX11Q96FC9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms