Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 AL160286.1-201ENST00000427215 2471 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 AC012313.5-201ENST00000594816 2517 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 DNM1P35-201ENST00000501931 3188 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 PARP6-201ENST00000260376 2142 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 AC110285.7-201ENST00000624417 1536 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 MED24-203ENST00000394127 3456 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 SCGB2B2-203ENST00000601241 2505 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 LINC00885-201ENST00000457079 1828 ntTSL 2 BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 AC068760.1-201ENST00000493579 1953 ntBASIC9.96□□□□□ -0.81
SVIPQ8NHG7 STRCP1-201ENST00000509801 5328 ntBASIC9.96□□□□□ -0.81
SVIPQ8NHG7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SVIPQ8NHG7 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 OR7A1P-201ENST00000601206 970 ntBASIC9.96□□□□□ -0.82
SVIPQ8NHG7 DNAJC2-204ENST00000412522 3033 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 AC084879.1-202ENST00000636927 2284 ntTSL 5 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 MUC4-204ENST00000349607 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 AL392083.1-201ENST00000632982 2985 ntBASIC9.96□□□□□ -0.82
SVIPQ8NHG7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC9.96□□□□□ -0.82
SVIPQ8NHG7 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 MBP-211ENST00000397875 2168 ntTSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 QARS-202ENST00000414533 2412 ntTSL 2 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 ACVR2B-AS1-201ENST00000441531 2517 ntTSL 2 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 MAB21L2-201ENST00000317605 2772 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 MRVI1-214ENST00000534266 2824 ntTSL 2 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 DDX12P-201ENST00000432996 2947 ntBASIC9.95□□□□□ -0.82
SVIPQ8NHG7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 NEFL-204ENST00000639464 3205 ntTSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 ARHGAP30-203ENST00000368016 3482 ntTSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 AC092028.1-202ENST00000641483 3547 ntBASIC9.95□□□□□ -0.82
SVIPQ8NHG7 AC092028.1-201ENST00000641781 3540 ntBASIC9.95□□□□□ -0.82
SVIPQ8NHG7 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC9.95□□□□□ -0.82
SVIPQ8NHG7 AC016542.2-201ENST00000624201 619 ntBASIC9.95□□□□□ -0.82
SVIPQ8NHG7 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms