RNA–Protein interactions for RNA: ENST00000349607.8

MUC4-204, Transcript of mucin 4, cell surface associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MUC4, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-204ENST00000349607 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
MUC4-204ENST00000349607 DCAF8L2P0C7V8 631 aa19.53■□□□□ 0.72
MUC4-204ENST00000349607 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
MUC4-204ENST00000349607 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
MUC4-204ENST00000349607 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
MUC4-204ENST00000349607 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
MUC4-204ENST00000349607 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
MUC4-204ENST00000349607 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
MUC4-204ENST00000349607 MYT1Q01538 1121 aa18.19■□□□□ 0.5
MUC4-204ENST00000349607 FAM9AQ8IZU1 332 aaPredicted RBP18.12■□□□□ 0.49
MUC4-204ENST00000349607 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
MUC4-204ENST00000349607 HRCP23327 699 aa17.96■□□□□ 0.47
MUC4-204ENST00000349607 PPARGC1BQ86YN6 1023 aaKnown RBP17.85■□□□□ 0.45
MUC4-204ENST00000349607 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
MUC4-204ENST00000349607 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
MUC4-204ENST00000349607 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
MUC4-204ENST00000349607 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
MUC4-204ENST00000349607 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
MUC4-204ENST00000349607 CCDC180Q9P1Z9 1646 aa17.42■□□□□ 0.38
MUC4-204ENST00000349607 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
MUC4-204ENST00000349607 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
MUC4-204ENST00000349607 SCAF1Q9H7N4 1312 aaKnown RBP17.33■□□□□ 0.37
MUC4-204ENST00000349607 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
MUC4-204ENST00000349607 ABCC9O60706 1549 aa17.31■□□□□ 0.36
MUC4-204ENST00000349607 UBTFP17480 764 aaKnown RBP17.25■□□□□ 0.35
MUC4-204ENST00000349607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
MUC4-204ENST00000349607 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
MUC4-204ENST00000349607 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
MUC4-204ENST00000349607 APLP2Q06481 763 aa17.1■□□□□ 0.33
MUC4-204ENST00000349607 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
MUC4-204ENST00000349607 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
MUC4-204ENST00000349607 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
MUC4-204ENST00000349607 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
MUC4-204ENST00000349607 CENPBP07199 599 aaPredicted RBP16.89■□□□□ 0.29
MUC4-204ENST00000349607 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
MUC4-204ENST00000349607 DIEXFQ68CQ4 756 aaKnown RBP16.81■□□□□ 0.28
MUC4-204ENST00000349607 ACIN1Q9UKV3 1341 aaKnown RBP16.79■□□□□ 0.28
MUC4-204ENST00000349607 RB1CC1Q8TDY2 1594 aa16.75■□□□□ 0.27
MUC4-204ENST00000349607 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
MUC4-204ENST00000349607 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
MUC4-204ENST00000349607 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
MUC4-204ENST00000349607 ATP1B4Q9UN42 357 aaPredicted RBP16.7■□□□□ 0.26
MUC4-204ENST00000349607 ITGAEP38570 1179 aa16.69■□□□□ 0.26
MUC4-204ENST00000349607 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
MUC4-204ENST00000349607 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
MUC4-204ENST00000349607 PRKCSHP14314 528 aaPredicted RBP16.56■□□□□ 0.24
MUC4-204ENST00000349607 ZNF316A6NFI3 1004 aaPredicted RBP16.51■□□□□ 0.23
MUC4-204ENST00000349607 NACADO15069 1562 aa16.51■□□□□ 0.23
MUC4-204ENST00000349607 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
MUC4-204ENST00000349607 SOGA1O94964 1423 aa16.45■□□□□ 0.22
MUC4-204ENST00000349607 WIZO95785 1651 aa16.44■□□□□ 0.22
MUC4-204ENST00000349607 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
MUC4-204ENST00000349607 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
MUC4-204ENST00000349607 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
MUC4-204ENST00000349607 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
MUC4-204ENST00000349607 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
MUC4-204ENST00000349607 MIER1Q8N108 512 aa16.3■□□□□ 0.2
MUC4-204ENST00000349607 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
MUC4-204ENST00000349607 CLIP1P30622 1438 aa16.28■□□□□ 0.2
MUC4-204ENST00000349607 FAM50AQ14320 339 aaKnown RBP16.28■□□□□ 0.2
MUC4-204ENST00000349607 P3H3Q8IVL6 736 aa16.27■□□□□ 0.2
MUC4-204ENST00000349607 ANP32EQ9BTT0 268 aa16.27■□□□□ 0.2
MUC4-204ENST00000349607 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
MUC4-204ENST00000349607 GOLGA3Q08378 1498 aa16.23■□□□□ 0.19
MUC4-204ENST00000349607 EEA1Q15075 1411 aa16.19■□□□□ 0.18
MUC4-204ENST00000349607 BCANQ96GW7 911 aa16.11■□□□□ 0.17
MUC4-204ENST00000349607 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
MUC4-204ENST00000349607 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
MUC4-204ENST00000349607 NEFLP07196 543 aa16.07■□□□□ 0.16
MUC4-204ENST00000349607 BAZ1BQ9UIG0 1483 aaKnown RBP16.07■□□□□ 0.16
MUC4-204ENST00000349607 CNGB1Q14028 1251 aaPredicted RBP16.05■□□□□ 0.16
MUC4-204ENST00000349607 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
MUC4-204ENST00000349607 SMARCA4P51532 1647 aa16.02■□□□□ 0.16
MUC4-204ENST00000349607 HIRIP3Q9BW71 556 aaPredicted RBP16.01■□□□□ 0.15
MUC4-204ENST00000349607 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
MUC4-204ENST00000349607 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
MUC4-204ENST00000349607 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
MUC4-204ENST00000349607 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
MUC4-204ENST00000349607 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
MUC4-204ENST00000349607 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
MUC4-204ENST00000349607 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
MUC4-204ENST00000349607 SIN3AQ96ST3 1273 aa15.88■□□□□ 0.13
MUC4-204ENST00000349607 ANP32CO43423 234 aa15.86■□□□□ 0.13
MUC4-204ENST00000349607 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
MUC4-204ENST00000349607 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
MUC4-204ENST00000349607 FKBP8Q14318 412 aa15.82■□□□□ 0.12
MUC4-204ENST00000349607 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
MUC4-204ENST00000349607 TSHZ2Q9NRE2 1034 aa15.79■□□□□ 0.12
MUC4-204ENST00000349607 CCNB3Q8WWL7 1395 aa15.79■□□□□ 0.12
MUC4-204ENST00000349607 CLSPNQ9HAW4 1339 aa15.76■□□□□ 0.11
MUC4-204ENST00000349607 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
MUC4-204ENST00000349607 CUX2O14529 1486 aa15.73■□□□□ 0.11
MUC4-204ENST00000349607 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
MUC4-204ENST00000349607 DHX57Q6P158 1386 aaKnown RBP15.72■□□□□ 0.11
MUC4-204ENST00000349607 ZNF326Q5BKZ1 582 aaKnown RBP15.72■□□□□ 0.11
MUC4-204ENST00000349607 KCNH8Q96L42 1107 aa15.71■□□□□ 0.11
MUC4-204ENST00000349607 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
MUC4-204ENST00000349607 SUPT16HQ9Y5B9 1047 aaKnown RBP15.7■□□□□ 0.1
MUC4-204ENST00000349607 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
MUC4-204ENST00000349607 MTUS2Q5JR59 1369 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms