Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 LINC01238-205ENST00000567549 1107 ntBASIC14.11□□□□□ -0.15
BEST4Q8NFU0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 AP005901.3-202ENST00000581653 237 ntBASIC14.11□□□□□ -0.15
BEST4Q8NFU0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.11□□□□□ -0.15
BEST4Q8NFU0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.11□□□□□ -0.15
BEST4Q8NFU0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 CHCHD2P8-201ENST00000429873 447 ntBASIC14.1□□□□□ -0.15
BEST4Q8NFU0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 AC022616.7-201ENST00000525383 220 ntBASIC14.1□□□□□ -0.15
BEST4Q8NFU0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 NTF6B-201ENST00000591913 560 ntBASIC14.1□□□□□ -0.15
BEST4Q8NFU0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 ST20-AS1-201ENST00000560255 4223 ntBASIC14.1□□□□□ -0.15
BEST4Q8NFU0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.1□□□□□ -0.15
BEST4Q8NFU0 AC079781.5-202ENST00000641784 3743 ntBASIC14.1□□□□□ -0.15
BEST4Q8NFU0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BEST4Q8NFU0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BEST4Q8NFU0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.09□□□□□ -0.15
BEST4Q8NFU0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.09□□□□□ -0.15
BEST4Q8NFU0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
BEST4Q8NFU0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
BEST4Q8NFU0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BEST4Q8NFU0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms