Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 AL353732.1-201ENST00000569618 1459 ntBASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 CICP4-201ENST00000447359 2812 ntBASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 AC074051.2-201ENST00000565115 352 ntBASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 AL139424.1-201ENST00000607572 797 ntBASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 TNRC18P2-201ENST00000417666 2714 ntBASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 AC020658.6-201ENST00000623564 1870 ntBASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM42Q8IWZ5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 IGHV3-47-201ENST00000425060 335 ntBASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 AC087163.2-201ENST00000457299 853 ntBASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 AC087641.1-201ENST00000557561 1021 ntBASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM42Q8IWZ5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms