Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX1P83916 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.03■□□□□ 0.32
CBX1P83916 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CBX1P83916 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX1P83916 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 AC073869.1-201ENST00000415574 2762 ntBASIC17.03■□□□□ 0.32
CBX1P83916 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.03■□□□□ 0.32
CBX1P83916 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CBX1P83916 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CBX1P83916 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX1P83916 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX1P83916 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CBX1P83916 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CBX1P83916 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CBX1P83916 AC006970.2-201ENST00000450065 779 ntBASIC17.02■□□□□ 0.32
CBX1P83916 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.02■□□□□ 0.32
CBX1P83916 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.02■□□□□ 0.32
CBX1P83916 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC17.02■□□□□ 0.32
CBX1P83916 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CBX1P83916 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CBX1P83916 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CBX1P83916 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.02■□□□□ 0.31
CBX1P83916 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX1P83916 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX1P83916 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX1P83916 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX1P83916 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CBX1P83916 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX1P83916 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.02■□□□□ 0.31
CBX1P83916 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.02■□□□□ 0.31
CBX1P83916 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.02■□□□□ 0.31
CBX1P83916 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX1P83916 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CBX1P83916 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CBX1P83916 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.01■□□□□ 0.31
CBX1P83916 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.01■□□□□ 0.31
CBX1P83916 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.01■□□□□ 0.31
CBX1P83916 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 MYCLP1-201ENST00000372451 1075 ntBASIC17.01■□□□□ 0.31
CBX1P83916 KRT18P29-201ENST00000397031 1267 ntBASIC17.01■□□□□ 0.31
CBX1P83916 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.01■□□□□ 0.31
CBX1P83916 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 TSPY6P-201ENST00000448518 926 ntBASIC17.01■□□□□ 0.31
CBX1P83916 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.01■□□□□ 0.31
CBX1P83916 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.01■□□□□ 0.31
CBX1P83916 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CBX1P83916 AL118506.1-201ENST00000601296 3082 ntBASIC17.01■□□□□ 0.31
CBX1P83916 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX1P83916 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX1P83916 NUTM2HP-201ENST00000442076 2498 ntBASIC17.01■□□□□ 0.31
CBX1P83916 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17■□□□□ 0.31
CBX1P83916 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CBX1P83916 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC17■□□□□ 0.31
CBX1P83916 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CBX1P83916 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms