Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 AC004461.1-201ENST00000412461 403 ntBASIC14.95□□□□□ -0.02
CLDN20P56880 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CLDN20P56880 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDN20P56880 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN20P56880 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN20P56880 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 AKAP8P1-201ENST00000434743 1349 ntBASIC14.94□□□□□ -0.02
CLDN20P56880 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CLDN20P56880 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.94□□□□□ -0.02
CLDN20P56880 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 AC079140.1-201ENST00000508039 487 ntBASIC14.94□□□□□ -0.02
CLDN20P56880 AP000344.2-201ENST00000512987 629 ntBASIC14.94□□□□□ -0.02
CLDN20P56880 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 AC243562.1-201ENST00000560672 389 ntBASIC14.94□□□□□ -0.02
CLDN20P56880 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
CLDN20P56880 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CLDN20P56880 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
CLDN20P56880 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN20P56880 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN20P56880 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN20P56880 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CLDN20P56880 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN20P56880 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN20P56880 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN20P56880 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN20P56880 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN20P56880 RN7SL589P-201ENST00000481268 310 ntBASIC14.93□□□□□ -0.02
CLDN20P56880 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms