Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.1□□□□□ -0.47
CMC4P56277 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.1□□□□□ -0.47
CMC4P56277 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.1□□□□□ -0.47
CMC4P56277 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.1□□□□□ -0.47
CMC4P56277 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
CMC4P56277 AC007967.4-201ENST00000614700 386 ntBASIC12.1□□□□□ -0.47
CMC4P56277 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CMC4P56277 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 FLJ38576-201ENST00000623820 2459 ntBASIC12.1□□□□□ -0.47
CMC4P56277 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CMC4P56277 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CMC4P56277 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.1□□□□□ -0.47
CMC4P56277 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 AP001282.1-201ENST00000531301 1499 ntBASIC12.09□□□□□ -0.47
CMC4P56277 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 LTB4R2-202ENST00000528054 3092 ntBASIC12.09□□□□□ -0.47
CMC4P56277 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.09□□□□□ -0.47
CMC4P56277 FAM58DP-201ENST00000428076 619 ntBASIC12.09□□□□□ -0.47
CMC4P56277 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.09□□□□□ -0.47
CMC4P56277 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.09□□□□□ -0.47
CMC4P56277 AC093520.2-201ENST00000561830 333 ntBASIC12.09□□□□□ -0.47
CMC4P56277 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.09□□□□□ -0.47
CMC4P56277 AC061975.2-201ENST00000581722 295 ntBASIC12.09□□□□□ -0.47
CMC4P56277 MIR6080-201ENST00000617359 66 ntBASIC12.09□□□□□ -0.47
CMC4P56277 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 AC006449.6-201ENST00000612330 2296 ntBASIC12.09□□□□□ -0.47
CMC4P56277 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.09□□□□□ -0.47
CMC4P56277 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 MTHFR-217ENST00000641820 1569 ntBASIC12.09□□□□□ -0.47
CMC4P56277 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CMC4P56277 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.09□□□□□ -0.47
CMC4P56277 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CMC4P56277 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CMC4P56277 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms