Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.4■□□□□ 0.22
XPAP23025 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.4■□□□□ 0.22
XPAP23025 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
XPAP23025 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
XPAP23025 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.4■□□□□ 0.22
XPAP23025 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
XPAP23025 MIR770-201ENST00000390219 98 ntBASIC16.4■□□□□ 0.22
XPAP23025 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.4■□□□□ 0.22
XPAP23025 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.4■□□□□ 0.22
XPAP23025 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.4■□□□□ 0.22
XPAP23025 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.4■□□□□ 0.22
XPAP23025 AC069120.2-201ENST00000524091 540 ntBASIC16.4■□□□□ 0.22
XPAP23025 AC140878.1-201ENST00000565277 250 ntBASIC16.4■□□□□ 0.22
XPAP23025 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.4■□□□□ 0.22
XPAP23025 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.4■□□□□ 0.22
XPAP23025 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
XPAP23025 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.4■□□□□ 0.22
XPAP23025 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.4■□□□□ 0.22
XPAP23025 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
XPAP23025 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.4■□□□□ 0.22
XPAP23025 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
XPAP23025 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
XPAP23025 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XPAP23025 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
XPAP23025 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.39■□□□□ 0.22
XPAP23025 NKILA-202ENST00000614771 2598 ntBASIC16.39■□□□□ 0.22
XPAP23025 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.39■□□□□ 0.21
XPAP23025 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.39■□□□□ 0.21
XPAP23025 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
XPAP23025 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.39■□□□□ 0.21
XPAP23025 MTND6P24-201ENST00000440466 518 ntBASIC16.39■□□□□ 0.21
XPAP23025 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.39■□□□□ 0.21
XPAP23025 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.39■□□□□ 0.21
XPAP23025 DUX4L27-201ENST00000554796 1261 ntBASIC16.39■□□□□ 0.21
XPAP23025 AC051619.7-201ENST00000568314 623 ntBASIC16.39■□□□□ 0.21
XPAP23025 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.39■□□□□ 0.21
XPAP23025 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
XPAP23025 AL365330.1-201ENST00000607459 531 ntBASIC16.39■□□□□ 0.21
XPAP23025 PCDHA12-202ENST00000613593 2588 ntBASIC16.39■□□□□ 0.21
XPAP23025 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.39■□□□□ 0.21
XPAP23025 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.39■□□□□ 0.21
XPAP23025 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
XPAP23025 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
XPAP23025 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
XPAP23025 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
XPAP23025 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
XPAP23025 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XPAP23025 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
XPAP23025 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
XPAP23025 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
XPAP23025 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
XPAP23025 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.38■□□□□ 0.21
XPAP23025 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XPAP23025 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
XPAP23025 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms