Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 AC010491.1-201ENST00000563101 2797 ntBASIC14.67□□□□□ -0.06
HLA-DQA2P01906 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 AL513480.1-201ENST00000451731 511 ntBASIC14.67□□□□□ -0.06
HLA-DQA2P01906 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.67□□□□□ -0.06
HLA-DQA2P01906 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 AC117500.6-201ENST00000624871 588 ntBASIC14.67□□□□□ -0.06
HLA-DQA2P01906 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQA2P01906 AP003680.1-201ENST00000598970 3660 ntBASIC14.67□□□□□ -0.06
HLA-DQA2P01906 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 AC108751.1-201ENST00000490852 363 ntBASIC14.66□□□□□ -0.06
HLA-DQA2P01906 CXCL1P1-201ENST00000502804 216 ntBASIC14.66□□□□□ -0.06
HLA-DQA2P01906 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 RN7SL510P-201ENST00000581311 263 ntBASIC14.66□□□□□ -0.06
HLA-DQA2P01906 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 MIR4515-201ENST00000584082 81 ntBASIC14.66□□□□□ -0.06
HLA-DQA2P01906 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 AL773604.1-201ENST00000617417 272 ntBASIC14.66□□□□□ -0.06
HLA-DQA2P01906 FAM215A-202ENST00000632077 792 ntBASIC14.66□□□□□ -0.06
HLA-DQA2P01906 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQA2P01906 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQA2P01906 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQA2P01906 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQA2P01906 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HLA-DQA2P01906 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQA2P01906 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DQA2P01906 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQA2P01906 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms