Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 AC104109.2-201ENST00000602919 1418 ntBASIC14.86□□□□□ -0.03
RNF13O43567 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF13O43567 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF13O43567 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 PMS2P4-201ENST00000412466 1052 ntBASIC14.86□□□□□ -0.03
RNF13O43567 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 AC096734.2-201ENST00000562054 433 ntBASIC14.86□□□□□ -0.03
RNF13O43567 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.86□□□□□ -0.03
RNF13O43567 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 AC010507.1-201ENST00000633895 436 ntBASIC14.86□□□□□ -0.03
RNF13O43567 AC007064.4-201ENST00000637740 555 ntBASIC14.86□□□□□ -0.03
RNF13O43567 AC067930.6-201ENST00000623257 4947 ntBASIC14.86□□□□□ -0.03
RNF13O43567 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF13O43567 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF13O43567 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 AC006449.6-201ENST00000612330 2296 ntBASIC14.86□□□□□ -0.03
RNF13O43567 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RNF13O43567 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF13O43567 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.85□□□□□ -0.03
RNF13O43567 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.85□□□□□ -0.03
RNF13O43567 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.85□□□□□ -0.03
RNF13O43567 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RNF13O43567 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.85□□□□□ -0.03
RNF13O43567 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.85□□□□□ -0.03
RNF13O43567 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF13O43567 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF13O43567 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF13O43567 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF13O43567 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
RNF13O43567 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RNF13O43567 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF13O43567 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF13O43567 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF13O43567 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF13O43567 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms