Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 AC104076.2-201ENST00000448912 469 ntBASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 AC063952.2-201ENST00000498792 1227 ntBASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 AC012306.2-201ENST00000609350 630 ntBASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MEIS3P1A6NDR6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 AC006486.2-201ENST00000624246 2199 ntBASIC14□□□□□ -0.17
MEIS3P1A6NDR6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 DKFZP434H168-201ENST00000567381 1905 ntBASIC14□□□□□ -0.17
MEIS3P1A6NDR6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 KRT18P1-202ENST00000452408 1331 ntBASIC14□□□□□ -0.17
MEIS3P1A6NDR6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 AC022616.7-201ENST00000525383 220 ntBASIC14□□□□□ -0.17
MEIS3P1A6NDR6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 Z69720.1-201ENST00000601483 472 ntBASIC14□□□□□ -0.17
MEIS3P1A6NDR6 AC064862.7-201ENST00000604520 867 ntBASIC14□□□□□ -0.17
MEIS3P1A6NDR6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 AC131009.4-201ENST00000624048 1740 ntBASIC14□□□□□ -0.17
MEIS3P1A6NDR6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MEIS3P1A6NDR6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 AC007686.3-201ENST00000619017 3487 ntBASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 AC138035.3-201ENST00000622706 2791 ntBASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MEIS3P1A6NDR6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms