Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 GGT4P-201ENST00000623672 1708 ntBASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
RPH3AQ9Y2J0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 AC069335.1-201ENST00000489972 472 ntBASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 AC027307.2-201ENST00000591252 911 ntBASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPH3AQ9Y2J0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 PCDH8P1-201ENST00000428983 2773 ntBASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 AC005052.1-201ENST00000625181 2492 ntBASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 AC027612.4-201ENST00000605371 583 ntBASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RPH3AQ9Y2J0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.96□□□□□ -0.01
RPH3AQ9Y2J0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms