Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.71■□□□□ 0.59
USP25Q9UHP3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.71■□□□□ 0.59
USP25Q9UHP3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.71■□□□□ 0.59
USP25Q9UHP3 AC010654.1-201ENST00000615722 808 ntBASIC18.71■□□□□ 0.59
USP25Q9UHP3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.71■□□□□ 0.59
USP25Q9UHP3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.71■□□□□ 0.59
USP25Q9UHP3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.71■□□□□ 0.59
USP25Q9UHP3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
USP25Q9UHP3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.71■□□□□ 0.59
USP25Q9UHP3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP25Q9UHP3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
USP25Q9UHP3 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.71■□□□□ 0.59
USP25Q9UHP3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
USP25Q9UHP3 FAM45BP-202ENST00000592932 1624 ntBASIC18.71■□□□□ 0.58
USP25Q9UHP3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
USP25Q9UHP3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 EMBP1-201ENST00000458200 901 ntBASIC18.7■□□□□ 0.58
USP25Q9UHP3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP25Q9UHP3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.7■□□□□ 0.58
USP25Q9UHP3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.69■□□□□ 0.58
USP25Q9UHP3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 AC012640.2-201ENST00000561606 901 ntBASIC18.69■□□□□ 0.58
USP25Q9UHP3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 AC012569.1-201ENST00000591191 1524 ntBASIC18.69■□□□□ 0.58
USP25Q9UHP3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP25Q9UHP3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.69■□□□□ 0.58
USP25Q9UHP3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP25Q9UHP3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.68■□□□□ 0.58
USP25Q9UHP3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms