Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPARGC1AQ9UBK2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AC004967.1-201ENST00000453589 447 ntBASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 LINC01225-203ENST00000563550 1244 ntBASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AC073389.1-201ENST00000595595 795 ntBASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AC022145.2-201ENST00000598203 171 ntBASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17■□□□□ 0.31
PPARGC1AQ9UBK2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 ME2P1-201ENST00000426028 1970 ntBASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 SPCS2P4-201ENST00000436160 681 ntBASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 TIMM8BP1-201ENST00000452384 211 ntBASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 KRT8P23-201ENST00000560090 1207 ntBASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 AC139530.3-201ENST00000620344 690 ntBASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 AC073439.1-201ENST00000624121 1774 ntBASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.99■□□□□ 0.31
PPARGC1AQ9UBK2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 AC022188.1-201ENST00000620960 1664 ntBASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PPARGC1AQ9UBK2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms