Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD248Q9HCU0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD248Q9HCU0 CICP4-201ENST00000447359 2812 ntBASIC17.18■□□□□ 0.34
CD248Q9HCU0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CD248Q9HCU0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.18■□□□□ 0.34
CD248Q9HCU0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.18■□□□□ 0.34
CD248Q9HCU0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 MIR4515-201ENST00000584082 81 ntBASIC17.17■□□□□ 0.34
CD248Q9HCU0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 AL009178.2-201ENST00000597278 2719 ntBASIC17.17■□□□□ 0.34
CD248Q9HCU0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD248Q9HCU0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CD248Q9HCU0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 FAM8A3P-201ENST00000427218 844 ntBASIC17.16■□□□□ 0.34
CD248Q9HCU0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 AC243562.1-201ENST00000560672 389 ntBASIC17.16■□□□□ 0.34
CD248Q9HCU0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 LINC00628-201ENST00000628516 1289 ntBASIC17.16■□□□□ 0.34
CD248Q9HCU0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 TNRC18P2-201ENST00000417666 2714 ntBASIC17.16■□□□□ 0.34
CD248Q9HCU0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.16■□□□□ 0.34
CD248Q9HCU0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD248Q9HCU0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD248Q9HCU0 HMGA1P7-201ENST00000406908 502 ntBASIC17.15■□□□□ 0.34
CD248Q9HCU0 AL671277.1-201ENST00000429656 993 ntBASIC17.15■□□□□ 0.34
CD248Q9HCU0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.15■□□□□ 0.34
CD248Q9HCU0 AC004449.1-201ENST00000564240 433 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms