Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SVIPQ8NHG7 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC9.99□□□□□ -0.81
SVIPQ8NHG7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
SVIPQ8NHG7 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 NEIL1-201ENST00000355059 3759 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 BOLA2-SMG1P6-201ENST00000565417 3103 ntTSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 CAMK1G-201ENST00000009105 2612 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 STX16-202ENST00000355957 4897 ntTSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC9.98□□□□□ -0.81
SVIPQ8NHG7 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 CICP19-201ENST00000632944 2357 ntBASIC9.98□□□□□ -0.81
SVIPQ8NHG7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 ZC4H2-202ENST00000374839 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 C4orf3-201ENST00000399075 2960 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 AC073133.2-201ENST00000436670 2698 ntTSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 SRRM5-202ENST00000607544 2698 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 BRINP2-201ENST00000361539 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
SVIPQ8NHG7 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 RAD52-204ENST00000430095 2366 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 AC022415.1-201ENST00000472362 1517 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 GNG2-201ENST00000335281 3729 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 AP005242.4-201ENST00000623533 2529 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 PCDHA3-202ENST00000532566 4594 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 CYP11B1-201ENST00000292427 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 HSPE1P27-201ENST00000430808 296 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 LDHBP3-201ENST00000514909 822 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 RN7SL470P-201ENST00000583069 259 ntBASIC9.97□□□□□ -0.81
SVIPQ8NHG7 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC9.97□□□□□ -0.81
SVIPQ8NHG7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms