RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
NEIL1-201ENST00000355059 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
NEIL1-201ENST00000355059 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
NEIL1-201ENST00000355059 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
NEIL1-201ENST00000355059 ABCC9O60706 1549 aa19.48■□□□□ 0.71
NEIL1-201ENST00000355059 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
NEIL1-201ENST00000355059 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
NEIL1-201ENST00000355059 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.58
NEIL1-201ENST00000355059 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
NEIL1-201ENST00000355059 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
NEIL1-201ENST00000355059 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
NEIL1-201ENST00000355059 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
NEIL1-201ENST00000355059 NACADO15069 1562 aa18.13■□□□□ 0.49
NEIL1-201ENST00000355059 TRIM41Q8WV44 630 aa18■□□□□ 0.47
NEIL1-201ENST00000355059 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
NEIL1-201ENST00000355059 PCGF6Q9BYE7 350 aa17.98■□□□□ 0.47
NEIL1-201ENST00000355059 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
NEIL1-201ENST00000355059 CECR2Q9BXF3 1484 aa17.85■□□□□ 0.45
NEIL1-201ENST00000355059 RANGAP1P46060 587 aaPredicted RBP17.84■□□□□ 0.45
NEIL1-201ENST00000355059 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
NEIL1-201ENST00000355059 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
NEIL1-201ENST00000355059 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
NEIL1-201ENST00000355059 HRCP23327 699 aa17.64■□□□□ 0.42
NEIL1-201ENST00000355059 TTBK1Q5TCY1 1321 aaPredicted RBP17.63■□□□□ 0.41
NEIL1-201ENST00000355059 LOC105371045A0A1W2PR82 267 aa17.62■□□□□ 0.41
NEIL1-201ENST00000355059 MROH2BQ7Z745 1585 aa17.56■□□□□ 0.4
NEIL1-201ENST00000355059 UBTFP17480 764 aaKnown RBP17.55■□□□□ 0.4
NEIL1-201ENST00000355059 PPARGC1BQ86YN6 1023 aaKnown RBP17.49■□□□□ 0.39
NEIL1-201ENST00000355059 BAZ1AQ9NRL2 1556 aaPredicted RBP17.44■□□□□ 0.38
NEIL1-201ENST00000355059 MYT1Q01538 1121 aa17.43■□□□□ 0.38
NEIL1-201ENST00000355059 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
NEIL1-201ENST00000355059 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
NEIL1-201ENST00000355059 WIZO95785 1651 aa17.35■□□□□ 0.37
NEIL1-201ENST00000355059 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
NEIL1-201ENST00000355059 APLP2Q06481 763 aa17.24■□□□□ 0.35
NEIL1-201ENST00000355059 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
NEIL1-201ENST00000355059 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
NEIL1-201ENST00000355059 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
NEIL1-201ENST00000355059 FBLN2P98095 1184 aa17.18■□□□□ 0.34
NEIL1-201ENST00000355059 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
NEIL1-201ENST00000355059 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
NEIL1-201ENST00000355059 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
NEIL1-201ENST00000355059 ZEB1P37275 1124 aaPredicted RBP17.11■□□□□ 0.33
NEIL1-201ENST00000355059 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
NEIL1-201ENST00000355059 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
NEIL1-201ENST00000355059 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
NEIL1-201ENST00000355059 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
NEIL1-201ENST00000355059 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
NEIL1-201ENST00000355059 P3H3Q8IVL6 736 aa17■□□□□ 0.31
NEIL1-201ENST00000355059 CCER1Q8TC90 406 aaPredicted RBP17■□□□□ 0.31
NEIL1-201ENST00000355059 PRKCSHP14314 528 aaPredicted RBP16.99■□□□□ 0.31
NEIL1-201ENST00000355059 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
NEIL1-201ENST00000355059 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
NEIL1-201ENST00000355059 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
NEIL1-201ENST00000355059 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
NEIL1-201ENST00000355059 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
NEIL1-201ENST00000355059 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
NEIL1-201ENST00000355059 ARID3CA6NKF2 412 aa16.91■□□□□ 0.3
NEIL1-201ENST00000355059 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
NEIL1-201ENST00000355059 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
NEIL1-201ENST00000355059 ITGAEP38570 1179 aa16.83■□□□□ 0.28
NEIL1-201ENST00000355059 SOGA1O94964 1423 aa16.82■□□□□ 0.28
NEIL1-201ENST00000355059 NESP48681 1621 aa16.8■□□□□ 0.28
NEIL1-201ENST00000355059 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
NEIL1-201ENST00000355059 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
NEIL1-201ENST00000355059 CHMP7Q8WUX9 453 aaPredicted RBP16.71■□□□□ 0.26
NEIL1-201ENST00000355059 BCL11AQ9H165 835 aa16.7■□□□□ 0.26
NEIL1-201ENST00000355059 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
NEIL1-201ENST00000355059 CUX2O14529 1486 aa16.68■□□□□ 0.26
NEIL1-201ENST00000355059 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
NEIL1-201ENST00000355059 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
NEIL1-201ENST00000355059 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
NEIL1-201ENST00000355059 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
NEIL1-201ENST00000355059 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
NEIL1-201ENST00000355059 HMGXB3Q12766 1538 aa16.58■□□□□ 0.24
NEIL1-201ENST00000355059 CFTRP13569 1480 aa16.53■□□□□ 0.24
NEIL1-201ENST00000355059 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
NEIL1-201ENST00000355059 FAM50AQ14320 339 aaKnown RBP16.52■□□□□ 0.24
NEIL1-201ENST00000355059 DIEXFQ68CQ4 756 aaKnown RBP16.51■□□□□ 0.23
NEIL1-201ENST00000355059 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
NEIL1-201ENST00000355059 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
NEIL1-201ENST00000355059 CLIP1P30622 1438 aa16.47■□□□□ 0.23
NEIL1-201ENST00000355059 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
NEIL1-201ENST00000355059 EEA1Q15075 1411 aa16.46■□□□□ 0.23
NEIL1-201ENST00000355059 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
NEIL1-201ENST00000355059 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
NEIL1-201ENST00000355059 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
NEIL1-201ENST00000355059 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
NEIL1-201ENST00000355059 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.21
NEIL1-201ENST00000355059 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
NEIL1-201ENST00000355059 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
NEIL1-201ENST00000355059 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
NEIL1-201ENST00000355059 CUX1P39880 1505 aa16.35■□□□□ 0.21
NEIL1-201ENST00000355059 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
NEIL1-201ENST00000355059 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
NEIL1-201ENST00000355059 TOPBP1Q92547 1522 aa16.3■□□□□ 0.2
NEIL1-201ENST00000355059 IGF1RP08069 1367 aa16.29■□□□□ 0.2
NEIL1-201ENST00000355059 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
NEIL1-201ENST00000355059 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.19
NEIL1-201ENST00000355059 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms